Branchiostoma floridae (Florida lancelet): 118409423
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Entry
118409423 CDS
T01074
Name
(RefSeq) DDB1- and CUL4-associated factor 7-like isoform X1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118409423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118409423
03036 Chromosome and associated proteins [BR:
bfo03036
]
118409423
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118409423
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
118409423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
WD40
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
MIOS_WD40
WD40_Gbeta
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
118409423
NCBI-ProteinID:
XP_035666333
UniProt:
A0A9J7HVX5
LinkDB
All DBs
Position
2:complement(26794029..26806042)
Genome browser
AA seq
370 aa
AA seq
DB search
MATVPPKRKEIYKYEAPWTLYAANWSQRPDRRFRLAVGSFLEEYNNKVQVISLDESAQEL
KASSMFDHPYPCTKIMWIPDNKGIFPDLLATSGDYLRVWRAGEPDTRLECLLNNNKNSDF
CAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRCNLVSGHVKTQLIAHDKEVYD
IAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLAT
MAMDGMDVIILDVRVPCTPVARLSNHRACVNGIAWAPHSSCHICTADNDRQARIWHTQQT
ARAVGNPNRAYRAGDDHQALIWDIQQMPRAIEDPILAYTAEGEINQVQWSSSQPDWIAIC
YNRCLEILRV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggccacagtgccacccaaaaggaaggaaatttataagtacgaggcaccatggacgcta
tacgccgccaattggagccagaggcccgacagaagatttcggctcgcggtgggaagtttt
ctggaggaatacaacaacaaagtacaagtcatcagtttggatgagtcagctcaggagcta
aaagctagcagcatgttcgaccacccatacccatgcacaaagatcatgtggatacctgac
aataaaggaatcttcccagatcttctggcgacaagtggtgactaccttcgcgtgtggcga
gcgggagaaccggacacgcggctggaatgtctgctgaacaacaacaagaattccgacttt
tgcgcccctcttacctccttcgattggaatgaagtggatcccaacctgataggcacatcg
agcatcgacacgacatgtacgatatgggggctggagacaggacaggtgctcggcaggtgt
aacctggtgtctgggcatgtgaagacgcagctgatagcacatgacaaggaggtgtatgac
atagcgttcagtcgagcaggtggcggcagggacatgttcgcgtctgtcggtgccgacggt
tcggtacggatgtttgacctccgacacctggagcattccacaatcatatacgaggatccc
caacaccatccactgctgaggctatgttggaacaaacaggaccctaattacctggccacc
atggcgatggacgggatggacgtgatcatcctggacgtccgtgtcccctgcacgccggtc
gccaggctcagcaaccatcgcgcctgcgtgaacgggatcgcgtgggcgccccactcatca
tgccacatctgcacggctgacaatgatcgtcaggcacgtatctggcacacacaacagacg
gcccgcgctgtcgggaaccccaacagggcatacagagcaggagacgaccaccaggcgctg
atctgggacatccagcagatgccgcgcgccattgaggaccccatcctggcgtacacggcg
gagggcgagatcaaccaggtccagtggtcctccagccagccagactggatcgccatctgc
tacaaccgctgtctggagatcctgagggtgtga
DBGET
integrated database retrieval system
