Branchiostoma floridae (Florida lancelet): 118409515
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Entry
118409515 CDS
T01074
Name
(RefSeq) chondroitin sulfate synthase 1-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
bfo01100
Metabolic pathways
Module
bfo_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118409515
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bfo01003
]
118409515
Enzymes [BR:
bfo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
118409515
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
118409515
Glycosyltransferases [BR:
bfo01003
]
Glycan extension
O-Glycan
118409515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF3996
DUF7164
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
118409515
NCBI-ProteinID:
XP_035666477
UniProt:
A0A9J7HX38
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Position
2:complement(17171278..17202816)
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AA seq
792 aa
AA seq
DB search
MLWTRRAGMTARARMVVGLCAGLFLGFTLASWLVVQRADPPRGGSLGTRVGCRRDPTAAE
LLSSGAGDPGGPASTPKKESAGPERGKNLVYVGVMTAKKYLDSRAVAAYETWQKHIPGKV
EFYSAYDPNGFSPDGLSRVNIPGVDDAYPPQKKSFLMLKYMHDHYLDQYDWFMRADDDVY
IKGDKLEKFLRGVNSTRPLYIGQTGLGSPEEFGRLSLDAGENFCMGGPGMIMSRETLRRM
VPNISWCLKHLYTTHEDVEIGRCIQKFTGVACTWAYESQHLFFNDYKNDKKGRIENLHTV
GVQRAITMHPNKHPPYQYRLHNYLLSQRMHNLRQRTLNMHREVKVMSQLLLEDATEMDAK
LGDVPSLMHFTPRETAEVLTWQYLNNRQVYAAKDLQPRQAIPKALRAGLDDIIMQMMEMI
NRHSRTRGRIIDYKDIQYGYWRVNPMYGAEYVLDLLLLYRKHKGKKINVPVRRHAYLQQA
FSHIQFMEEETIMKGRSSQPDRAALGNVQKRHLVDKSRTADLSSIDTETVHFIIPLVGRL
QTLKQFLENYERTCLRTNEKVKLLIVLFKSRHKQQDQSSEIQKLVGQYQDMYPTAHLRIL
FVAGEFSRGLGLELGVSQFTNTSLLFFCDVDLVFQQSLLQRIRAKTILGQQAYYPIVFSQ
YDPSVVHRNSSVSIRNNFLLTKDTGYWRFYGFGTVSLYAADFIRVGQFDTSIQGWGMEDV
DLFDKFVRSDIKTFRVKDPGVVHVFHSVACDTHLEEKQYQMCLGTKAGTYGSAATLSKLW
LDRHPQRPDDSR
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggacgcggcgggccggcatgacggcgcgagccaggatggtggtcgggctatgt
gcgggactgtttctggggttcacgctcgccagctggctggtggtgcagagggccgacccg
cctagaggagggagtctcgggacccgagtgggatgcagacgggaccccacggctgcagag
ctgctgtccagcggggcgggcgacccaggcggaccggcgagtacgcccaagaaggagtca
gccggccctgagcggggcaagaatctcgtgtacgtcggggtgatgacggccaaaaaatac
ttggactcccgagcggtagccgcttacgagacctggcagaagcatattcccggcaaggtt
gaattctactccgcttacgatcccaacggcttctctccagacgggttgtcccgagttaac
atcccgggggttgacgacgcctatccccctcagaagaagtccttcctcatgctgaagtac
atgcacgaccattacttggaccagtatgactggttcatgagggctgatgatgatgtatac
atcaagggggacaaactagagaaattcctcaggggggtgaactccaccaggccactgtac
atcggacagacagggctgggcagtccggaagagtttggacgcctgtcgctggacgcgggc
gagaacttctgcatgggggggccggggatgatcatgagtcgagagacgctgaggaggatg
gtacccaacatctcatggtgtctgaagcacctgtacaccacacatgaagatgtagagatt
gggcgctgcattcagaagttcaccggggtagcctgcacatgggcatatgagagccaacac
ctgttcttcaacgattacaagaacgacaagaagggcagaattgagaaccttcacaccgtg
ggcgtgcagcgtgctatcaccatgcatcccaacaaacacccgccataccagtaccgcctc
cacaactacctcctgagccagcgcatgcacaacctgcgccaacggaccctcaacatgcac
cgggaggtcaaagtcatgagtcagctgctgctggaggatgccacagagatggacgccaag
ctgggcgatgtgccgtccctcatgcacttcaccccacgtgagactgcggaggtgctgacc
tggcagtacctgaacaatagacaggtgtacgcagctaaggacctacagcccaggcaggct
atcccgaaggcacttagagcaggcctagatgacatcatcatgcagatgatggagatgata
aatcgtcactcacgaactcgaggtcgtatcatcgattacaaggacatccagtacggttac
tggcgggtgaaccccatgtacggtgcagagtacgtgctggacttgctgctgttgtaccgc
aaacacaaggggaagaagattaatgttcctgtgaggagacatgcctacttacagcaggcc
ttcagccacatccagttcatggaggaggagacaatcatgaagggcagaagcagccaacct
gacagggctgcactggggaatgtgcaaaagcgccatctagtggataagagcagaactgct
gatctcagtagtattgacactgaaaccgtgcacttcattatcccccttgtagggaggctg
cagaccctcaaacagtttctggaaaattatgaaagaacttgcttgagaacaaatgagaag
gtaaaactcttgatagttctgttcaagagtagacacaaacaacaagaccaaagttcagaa
atccagaaactagtgggacagtatcaggacatgtatcccacagcccacctaagaatacta
tttgtagctggagagttttcccgtggactgggattggaactcggtgtttcccagttcact
aacacctcactcctattcttctgtgatgtagatctggtattccagcagtctttactacag
cgtatacgagctaagacaatacttggtcaacaggcctactatcctatagtcttcagccaa
tacgatcctagtgttgttcatcggaactcctccgtttccatcaggaacaatttcctgctc
accaaagacactgggtactggcgattctacggtttcggcactgtatctctgtatgctgcc
gatttcattcgagtggggcagtttgacacgtccatccagggttggggaatggaagacgtg
gatctctttgacaagtttgtacgcagtgacataaaaactttccgtgtgaaagaccccggg
gtggtccatgtgttccattcagtggcttgcgacacacacctggaagaaaagcaatatcag
atgtgcctgggcacgaaggcaggcacgtacggcagtgctgccacactatccaaactctgg
ttagacagacatccacagagacctgatgacagtcggtag
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