Branchiostoma floridae (Florida lancelet): 118409518
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Entry
118409518 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118409518
04121 Ubiquitin system [BR:
bfo04121
]
118409518
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118409518
Membrane trafficking [BR:
bfo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118409518
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118409518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-RING_5
HypA
Zn_ribbon_6
zf-ANAPC11
DZR
zf_RING_Vps8
IBR_1
C1_2
UBZ_FAAP20
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
118409518
NCBI-ProteinID:
XP_035666481
UniProt:
A0A9J7HVQ5
LinkDB
All DBs
Position
2:17139177..17147532
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AA seq
286 aa
AA seq
DB search
MAEAAVDQSSAGSVYFCHQCTQEVQPKLPDYTCPRCDSGFIEELTDNTFEPSGEDDEDGP
NNIDVNPAEQFAELWSRTFLGLDPSLTEPGRGSADRERDIRDRRTRLPRTQLRFRTRPAS
HRGIDRSPALESIIQQLLGGLGGAAGTGLYPPVFLQSGTGGLPAGFFNLHGNPGDYAWGP
GGLDAIITQLLNQLDGTGPPPADKKMIDALPTVTIIQEQVDNGLECTVCKEEYHLDERIR
QLPCGHCYHSDCIVPWLEMHNTCPVCRKSLDGSRTDMDMDNSLDPR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgctgtcgaccagtcttcggcaggatcggtgtatttttgccatcaatgt
actcaagaagtacaacctaagcttccggactacacctgcccaagatgtgactcaggtttc
atagaagaactgacagataacacatttgaaccatcaggggaggatgatgaagatggcccc
aataatattgatgtcaacccagcagagcagtttgcagagttatggagtaggactttcctg
ggcctggacccatcgttgacggagccaggtcggggctctgcggacagagaacgtgacata
cgagacaggagaacacggctgcccaggacacagctacgcttcagaacaagacctgcctca
cacaggggcatagacaggtcaccagcactagagagtatcatccagcagctgttgggagga
ctaggaggggcagcaggtactgggctttacccaccagtctttttacagtcagggactggt
ggtctccctgcgggtttcttcaatctccatggtaaccctggtgactacgcctggggacca
ggaggccttgatgccatcatcacccagttactgaatcagctagatggaacaggcccccct
cctgctgacaagaagatgatagatgccctccccactgtaacaatcatccaggaacaagtt
gataatggattggaatgtactgtgtgtaaagaagagtatcacctggatgaaaggataagg
cagctaccctgtggccattgttatcattcagactgtattgtaccatggctagaaatgcac
aacacgtgcccggtttgcagaaaaagcttggatggaagtcgaacagatatggacatggac
aacagcctagatcccagataa
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