Branchiostoma floridae (Florida lancelet): 118409649
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Entry
118409649 CDS
T01074
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04145
Phagosome
bfo04512
ECM-receptor interaction
bfo04820
Cytoskeleton in muscle cells
bfo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
118409649
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118409649
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118409649
09142 Cell motility
04820 Cytoskeleton in muscle cells
118409649
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118409649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118409649
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfo04147
]
118409649
04515 Cell adhesion molecules [BR:
bfo04515
]
118409649
04090 CD molecules [BR:
bfo04090
]
118409649
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
118409649
Exosome [BR:
bfo04147
]
Exosomal proteins
Proteins found in most exosomes
118409649
Cell adhesion molecules [BR:
bfo04515
]
Integrins
Integrin beta subunits
118409649
CD molecules [BR:
bfo04090
]
Proteins
118409649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
Integrin_B_tail
Integrin_b_cyt
I-EGF_1
PSI_integrin
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
118409649
NCBI-ProteinID:
XP_035666710
UniProt:
A0A9J7MFY7
LinkDB
All DBs
Position
2:22746872..22762008
Genome browser
AA seq
793 aa
AA seq
DB search
MGPRQRNSYVRLPSAVLCLTVLVTLCLGTLAEGDDVCSKNSPASCAECLRRGPQCAWCAE
ESYVEGSASRCDVISRLQENGCAASQIQNPASATVISQGRPLSSTGSQTGSDVTQVSPQE
VRLSLRPGDSAQVQMQVRQVKDYPVDLYYLMDLSKSMDNDLQNLKTLGVNLINKMRNITS
NFRVGFGSFVDKTVAPYVNLAPGKLNEPCGGCAPVFGFRNVLSLTDQAEEFSVQLGQQQV
SGNLDQPEGGFDALMQTAVCNEKIGWREKATKLIVFASDAPFHSAGDGKLGGILTPNDAK
CHLDSSGTYTELNNLDYPSVGQLIAVLEERNIQPIFAVTGEQIDIYRGLANMFSGAIAET
LAEDSSNVVFLVEDAYKKLRSEVRMQAPNVPEGIELQFTALCLDNQVIEGAAECKNLAVG
DTVAFNITVKLAECPQDGGELQFSLNPVGFGDEMKIKVTTMCSCDCSVDAVPDSDQCSAG
NGTLECGVCVCNTGRYGQTCECNADSVEAVDETKCRMDNATAVCSSRGDCLCGQCTCSAR
QDPREKVWGKFCECDNFSCLRHDRLICGGRGTCDCGQCVCESGWTGEACECSARTDACIS
ENGEVCNGHGTCECGKCKCEDNFAGPTCEECPTCPGKCEGNKGCVQCQAFQSGDVTDVDC
LQCPFNVTMVDSVDVVVDDPETQLCRFRDDDDCLFTFSYGKGDDNSLVVNVQRTKECPPE
VNILPIILGIVAGIVLIGLAILIIWRVLLYLYDRNEYQKFEREQQKTKFSSDINPLYRET
TTKFLNPTYGGNK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaagacagagaaactcgtatgtgcggctaccgagcgccgtgttgtgtctgaca
gtgctggtgaccctgtgtttggggaccttggcagaaggtgatgacgtatgttcgaagaac
agcccagcttcgtgcgcggaatgtcttaggcgcggtccgcagtgtgcgtggtgtgcagag
gagtcttacgttgaaggatcagcatcaaggtgtgacgtcatctcaagattacaggagaac
ggatgtgcagcaagtcaaatacaaaatcctgccagcgccacagtcatctctcagggacgc
ccactcagctccacagggagccagacaggcagtgacgtcacgcaggtgtcaccgcaggaa
gtgcgtctcagtttacggccaggtgacagcgcccaggtacagatgcaggtgcgccaggtg
aaggactacccagtagacctgtactacctcatggacctgtccaagtctatggacaacgac
ttgcaaaacctcaagacgctaggagtcaatctcattaacaagatgagaaacatcaccagt
aacttccgggtcgggttcgggtcctttgttgacaagacggtggcgccgtacgtgaacttg
gctcctgggaaactgaacgagccgtgcggcggctgtgcgcccgtgttcgggttcaggaac
gtgctgtccctgacggaccaggccgaggagttcagcgtacagctggggcagcagcaggtg
tccggcaacctggaccagccggagggcggcttcgacgcgctcatgcagaccgccgtctgt
aacgaaaaaataggctggcgagagaaggccaccaagctgatcgtgttcgccagtgacgcg
ccgttccactcggctggggacgggaagctgggcggcatcctgacgcctaacgacgccaag
tgccacctggactcctccggcacctacaccgagctcaacaacctggattacccgtcagta
ggccagctgatcgccgtgctggaggaacggaacattcagcccatcttcgccgtcaccggg
gagcagatcgacatctacaggggtctggcaaatatgttctctggcgccatcgcagaaact
ctagctgaagactcttccaacgtcgtgttcttggtagaggatgcctacaagaaactccgt
tccgaggtaaggatgcaggcccccaacgtgcctgaggggatcgaactgcagttcacggct
ctctgcctggacaaccaggtgatagagggcgctgctgagtgcaagaatctagcggtcggt
gacaccgtcgcgttcaacataacggtcaagttagccgagtgtccgcaagatggcggtgaa
ttgcagttctcgctgaacccggtaggtttcggagacgagatgaagatcaaggtgacaacg
atgtgctcctgcgactgctcagtggacgcggtcccggacagcgaccaatgttctgccggt
aacggtactctggagtgcggagtctgcgtttgcaacacgggcaggtacggccagacgtgt
gagtgtaatgcagacagtgtagaagccgtggacgagaccaagtgtcggatggacaacgcc
acggccgtgtgctcgagtcgtggagactgcctgtgcggacagtgtacgtgctcagctcgc
caggacccgcgggagaaggtctggggcaagttctgcgagtgcgacaacttctcttgtcta
agacacgacaggctcatctgcggtggtcgcggcacgtgtgattgcgggcagtgcgtgtgc
gagtcgggctggacgggagaggcgtgcgagtgttccgcccgcacggacgcctgcatctcc
gagaatggggaggtctgcaacggtcacggcacctgcgaatgtggcaagtgcaaatgtgag
gacaactttgctggaccaacatgcgaggaatgtccgacgtgcccagggaagtgtgaaggg
aacaaaggctgtgtgcagtgccaggccttccagtccggagacgtgacagacgtggactgt
ctgcagtgcccctttaacgtcaccatggtggacagtgtggacgtcgtcgtggacgatcct
gagacccagctgtgccgcttccgtgacgacgacgactgtttgttcaccttctcgtatggc
aagggtgacgacaactcactggtagtcaacgtgcagaggaccaaagaatgccctccggaa
gtcaacatccttcccatcatcctcggtatcgtggcagggatcgttctgattggtctagcc
atcctgatcatttggcgagtgctgctctatctgtacgacaggaacgagtatcagaagttc
gaaagagagcagcagaagaccaagttttcatcggacatcaacccactgtacagggagacg
acaacgaagttcctgaaccctacatatggcgggaacaagtga
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