Branchiostoma floridae (Florida lancelet): 118409822
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Entry
118409822 CDS
T01074
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118409822
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfo01009
]
118409822
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118409822
03029 Mitochondrial biogenesis [BR:
bfo03029
]
118409822
Protein phosphatases and associated proteins [BR:
bfo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118409822
Membrane trafficking [BR:
bfo04131
]
Autophagy
Autophagosome formation proteins
ULK complex
118409822
Mitochondrial biogenesis [BR:
bfo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
118409822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
ZMYND8_CC
TBK1_ULD
UBA_HYPK
Motif
Other DBs
NCBI-GeneID:
118409822
NCBI-ProteinID:
XP_035667054
UniProt:
A0A9J7MGN0
LinkDB
All DBs
Position
2:complement(15382699..15404513)
Genome browser
AA seq
1764 aa
AA seq
DB search
MLYVFLVDTGTMLTFDMSLALQPVNVLQQEVARSLSVPADKQVMLISGGDMLESKSRVCS
YSAGTDTNPIFLFSKVTIESAVPPSPSVDLGSDSDPRLQVEGCLNMPATYETVVARAQLA
LQFHDLAKDTVRSCEQLVHEQHLQQQGWAAVIANLEDCSSQFKIRVDSFEGLYSQYLVTR
PKFMDIIQTFPNTIKLLEKIPLLPCLQGAPMQGIQSSGGVVTSRVFQPQTLLQWINAKDP
SHTLEQLMEQCVRCMEQLDETVLQGLMAECNNILSSLNNPQMKEIKGLEDRLYGLEQLMA
GTRKIVQEQGDMAQAFVQNQSRCSNLGDPSILPDLCASHRKQLLVMLNNHKQLRDIRRRC
VIAKDELSANLHTRLRWIMYIEKAICELDSKLTIYYENIKRLKKRLEIVEQVSEAPTVYC
QAVAETCRRRQFSEQFLQWAGNLSQDFTQLREEEVNRRKEFKNIFRKHFLKMMFPGMEDY
PPGFATKPPDSFDKDLPFITQDDIQILQDTVPELSDSLRVPSPEELQQMSQHSSRFMHFS
LTSHEPPLRDQKSQDSQATLVGPSRSSSETSACPQTTPTSEYSRSQSQDTISSKSSRNEE
LASVPEKEEGTQPPVAHTETPQVAEASHAPRPVPHRSAPPTNVTVRRMQQQQESGSYSPD
SIDSHSVDLEYGSPTKRPVSDSFVSVNESPDEFMSATDVWQFQEGGYKSPPSSVGTPHES
VESSVVETLGNTLVVKTEGAKVKSPSQSHTHLQRSLQERKSTIDMLERQLVSAQRDLAKS
EDKCKKLHELHNKIQLQLKLGLVDLRQQVQDNRKDMSSHVALVTKQVFEVVSGLEKTMAS
EQEVAVQDAVGRVNEEKQALALDLEAKIQSEVSKCTKLNEEVQSLQEQLKERKVDEQNMT
REWDIRVDNMKTEFEASQKALQERLEEEHKVKMNDMNETLAQKEQFVLELQREKEVMMED
IAERFNSEKGEVVMTLRKEYEEAKKQAVTELQEKLKVDHGKALAALKDEHDTHLKSACET
IQHAMEQEKRGLEKQIKDLAEEVESLKAERDEEIERVRESMSEDKKTEVDMLISQLEIHK
EKCEEALQECVAKEEEIAKMKEIFKIEKETAIKAAVDMEKEKAQSEIQKLKDKQDEELRD
RENLVQTMKKSFEMEKKEVEQEVNMEKSRSLETVEGLKTQHEKELKEKQHTIEKLEKHFQ
EQKEELQKSVSEDQQKFEGEMEKLRTELERQLQQKDQELKLLRDIVEQEKSELMEKTISQ
EKHKHDSIVAEMQDNFDKQSKEKEDELTALQSRLQEAEGAKQTLEAEVAAVKEQQENAIA
EIKASSTQQISSQESEITHLKQQLGELKKDKDDETNLAAGLKADLQRQLEVKETMISKMQ
AQQDSLIAEALEAEGQKLGAELDRLREEKLEESRIFEMQLEKLKESFELQKAAAVKEALV
GVRQESIAGLSGAGSSEGAVTMAIGEERKKHEQELDSLKKSLENKMSSLKASLQAERQVA
FNEAVSKVVAEKDSEIEALRQNHHKLMEAWGTDKEALEMAQSAIAAAVDERERALRLAQW
REEELRALQADLDDANKKLEERSVVSERTPSIEQAMEAGDVEGATGMSVSTMSAITTISD
SPGSDVQEDRIRTLEMTLRKKEEECMTLSQRLMQRSMSALGGPTEKVAIKDFQIGDIVLI
CLDERHDNYVVFTVGLVLYFLHSDSLPALDLKSAKAPGAPRKPWVLGQITDKEYCQAKKP
QNRFKVPVGTKFYRVKAIPWGRKL
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgttatacgttttcctggtggacactggcaccatgctgaccttcgacatgagcctggcc
ttacagccagtgaatgtccttcagcaggaggtggcccgatcgctgagtgtgcctgcagac
aagcaggtcatgctcatcagtggtggagacatgttggagagcaagtcccgcgtctgcagc
tacagtgcaggcacggacaccaacccaatcttcctgttcagcaaggtgaccattgagtct
gctgtgccaccatctccaagtgtggaccttgggtctgactcggatcccagactgcaggtg
gaaggctgcctgaacatgcctgctacatacgagactgtggtggcacgggcacagctagca
ctgcaattccatgaccttgccaaggacacagtgcggtcatgtgaacagctggtccatgag
cagcacctgcagcagcagggctgggcagctgttatcgccaatctggaggactgctccagc
caattcaagatccgggtggacagttttgagggactgtacagccagtaccttgtcaccaga
cccaagttcatggacatcattcaaacgtttcccaacacaatcaaactgctggagaagatc
cctctgctgccctgtctgcagggggcccccatgcagggtatccagtcatccggcggggtt
gtgaccagtcgggtgttccagccacaaacgctgctgcagtggatcaatgcaaaggatccc
agccatacactagagcagctgatggagcagtgtgtgcgatgtatggaacagctggatgag
accgtactgcagggtctcatggcagagtgcaacaacattctcagttcccttaacaaccct
cagatgaaggagatcaaaggcctggaggacaggctatatggactggaacagctgatggca
ggcaccaggaaaatagtgcaagagcagggagacatggcacaggcttttgtccagaaccag
agccggtgcagtaacctgggtgacccctccatcctgcctgacctgtgtgccagccaccgt
aagcagctgctggtcatgctcaacaatcacaaacaactcagggacatacgacgacgatgt
gtcatcgctaaggacgaactgtctgccaacctgcacactagactgaggtggatcatgtac
atagagaaggccatctgtgagctggacagcaaacttaccatctactatgagaacatcaag
cggctgaagaagcgtctggagattgtggagcaggttagcgaggctcccactgtctactgc
caggccgtggcggaaacctgcaggaggaggcagttctctgaacagtttctacagtgggca
gggaacttgtcacaggacttcactcaactgagggaagaggaagtgaacagaaggaaggag
ttcaaaaacatttttagaaaacatttcctaaagatgatgttcccaggaatggaggattat
ccaccagggtttgcgacgaaacctcccgactctttcgacaaagaccttcccttcatcact
caagacgacatccagattctacaggatacagttccagaactgtccgactctctgagggta
ccaagtccagaggaactacagcaaatgtcccagcattcttctcgcttcatgcacttcagc
ttgacctcacatgaaccccctctacgggatcagaagtcacaggacagccaggctacactg
gtagggccttctaggtcatccagtgagaccagtgcctgtccacagaccacaccaacttca
gagtacagcagatctcaaagccaagacaccatctccagtaaatcctcaaggaatgaagag
ctggcaagtgttccagagaaggaggaagggacacaacctcctgttgcacacacagaaact
cctcaggtagctgaagcttctcatgccccacgaccagtgcctcaccgcagtgcccctccc
actaacgtcactgtccggagaatgcagcaacaacaagagtctgggtcctactctcccgac
agcattgactcacacagtgtagacctggagtatggaagtccaaccaaaagaccagtcagt
gacagttttgtatctgtaaatgaaagcccagatgagtttatgtctgctacagatgtgtgg
cagttccaggaggggggttacaaaagtccacccagttctgtaggcaccccacatgagtct
gtagagtcctcggtggtagagactttaggaaacacattggtggtgaagacagagggggca
aaggtcaagtcaccttcacagagccacactcatttacagaggagccttcaggagaggaag
tccaccatagacatgttggaaaggcagttggtctctgcacagagggatcttgcgaaatca
gaagataagtgcaagaagctgcatgagctgcacaacaagatccagctgcagctgaagctg
ggactggtggacctccggcaacaggtgcaggacaacaggaaggacatgtcctctcatgtt
gccttggtgacaaaacaagtctttgaggtggttagcggtctggagaagacgatggcgagc
gagcaggaagtggcagttcaggatgcagtaggtcgggtaaatgaggaaaagcaggcgttg
gccttggatcttgaggccaagattcagtctgaggtaagtaaatgtacaaagttaaatgaa
gaggtacaatctctacaagaacaactgaaggaaaggaaggtggatgaacaaaatatgact
cgagagtgggacataagggtggacaacatgaaaactgagtttgaagcatcacaaaaagca
cttcaagaacgtcttgaagaagaacacaaagtgaaaatgaatgacatgaatgaaacactg
gctcagaaggagcagttcgttctggagctccagagagaaaaggaagtaatgatggaggac
attgctgagaggtttaactcagagaaaggagaagttgtcatgacattgaggaaagaatat
gaggaagctaagaagcaagctgtgacagaactccaggagaagttgaaagtagatcatgga
aaggcattggcagctctgaaggatgaacatgacacccacctgaaatcagcatgtgagaca
atacaacatgcaatggagcaggagaagaggggcctagagaagcagataaaggacttggca
gaggaagtagaaagtctgaaagctgagagggatgaagagatagaaagagtaagagagagc
atgtcagaagacaaaaagactgaagtggacatgctgatttctcaactagaaattcataaa
gagaagtgtgaagaggctttacaagaatgtgtagctaaggaagaggaaattgcaaaaatg
aaagagatcttcaagattgagaaagaaactgcaattaaagcagcggttgatatggaaaaa
gagaaggctcaatctgagattcagaagctcaaggacaaacaggatgaggagttgagagac
agggaaaatctcgtacagacgatgaaaaagtcttttgagatggaaaagaaggaagttgaa
caagaagtaaatatggaaaaatcaagatccttagagacagtggaagggttgaaaactcag
catgaaaaagaattgaaggagaagcaacatacaattgaaaagttggagaaacattttcag
gaacagaaggaggagttgcaaaaatcagtttcggaggaccagcaaaagtttgaaggggag
atggaaaagctccgcacagaactagaaagacaactacaacagaaggaccaagagctaaaa
ttactaagagacatagtagaacaagagaaaagtgaacttatggaaaagaccatcagtcag
gagaaacataagcatgactctattgttgcagaaatgcaagataacttcgacaaacagtca
aaagaaaaggaagatgaactgactgccctgcaaagcaggcttcaggaagcagaaggtgct
aaacagacccttgaggcagaggtggcagccgttaaagaacagcaggaaaatgcaattgca
gagattaaggctagttctactcagcagattagtagccaagaatctgaaattactcacttg
aagcaacagcttggagagttgaaaaaggataaagatgatgaaactaacttggcagcaggg
ttgaaggctgaccttcagagacaacttgaagtaaaagaaactatgatatcaaagatgcaa
gcccagcaggatagtctcatagcagaggctttggaagctgagggacagaagttaggagca
gagctggacagactgagagaagaaaaactagaggaaagcagaatttttgaaatgcagctg
gaaaaattgaaagagtcgttcgagttgcagaaggctgcagctgttaaagaggcattggta
ggtgttagacaagagagtattgctgggctgtctggggctggaagcagtgagggtgcagtc
accatggcaataggagaggagagaaagaaacacgaacaagagctggacagtctgaaaaag
agtcttgaaaataagatgtcgagtttgaaggctagcctgcaggcagagcgccaggtggcc
tttaatgaagctgtaagtaaggtggtggctgagaaggacagtgagatagaggctctgaga
cagaaccatcacaaactgatggaggcctggggcacagacaaggaggccctagagatggct
caatcagccattgcagctgctgtggatgaaagagagagagcgctgcgacttgctcagtgg
agggaggaagaactcagagcacttcaggcagacttggatgatgcaaacaagaagcttgag
gaaagatctgtggtgtccgagagaaccccgtccattgagcaggccatggaggctggggat
gtggagggggcaacaggcatgtctgtctccaccatgtctgctataaccaccatcagtgat
tctccagggtctgatgttcaggaggacagaataaggactcttgaaatgactctgaggaag
aaagaagaggaatgtatgactttaagtcagagactgatgcagagatccatgtctgcacta
ggaggacctaccgagaaagtggctatcaaggatttccaaataggtgacattgtcctgatc
tgcctggatgagaggcatgataactatgttgtgttcactgtggggctcgtgctgtacttt
ctacactctgactccctccctgcactggacctcaagtcagctaaagctcccggtgctccc
aggaaaccttgggttttgggacagatcactgacaaggagtattgtcaggctaaaaagcct
cagaacaggttcaaggttcctgttggtaccaagttttacagagtcaaagccatcccatgg
ggcaggaaactgtga
DBGET
integrated database retrieval system
