Branchiostoma floridae (Florida lancelet): 118409832
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Entry
118409832 CDS
T01074
Name
(RefSeq) beta-hexosaminidase subunit alpha-like isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo00511
Other glycan degradation
bfo00513
Various types of N-glycan biosynthesis
bfo00520
Amino sugar and nucleotide sugar metabolism
bfo00531
Glycosaminoglycan degradation
bfo00600
Sphingolipid metabolism
bfo00603
Glycosphingolipid biosynthesis - globo and isoglobo series
bfo00604
Glycosphingolipid biosynthesis - ganglio series
bfo01100
Metabolic pathways
bfo04142
Lysosome
Module
bfo_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
118409832
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
118409832
00513 Various types of N-glycan biosynthesis
118409832
00531 Glycosaminoglycan degradation
118409832
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
118409832
00604 Glycosphingolipid biosynthesis - ganglio series
118409832
00511 Other glycan degradation
118409832
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118409832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bfo03110
]
118409832
Enzymes [BR:
bfo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
118409832
Chaperones and folding catalysts [BR:
bfo03110
]
Intramolecular chaperones
Others
118409832
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Peptidase_C57
STALD
Motif
Other DBs
NCBI-GeneID:
118409832
NCBI-ProteinID:
XP_035667077
UniProt:
A0A9J7KN93
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All DBs
Position
2:15822957..15840215
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AA seq
541 aa
AA seq
DB search
MAVLSTIQCVFSVVLVLFASPLPCLNVRAYQRPVMVQQTGKVLPKPQMMTVSAEAYTLAM
SSFKFTYGSSSEMCDIVDQAFRRYYDLIFDVDGPKKAPKVPESMAELTVLQVMVKEPCKG
AYPSLESSENYTLTVTAPMGMLVADSAWGVLRGLETFSQLIYRTDDGTMIINKTTVDDFP
RFAHRGILLDTSRHFIPLKYIKQNLDAMAYNKFNVFHWHIVDDQSFPYQSVVFPDLSAKG
AFNPYTHLYTQEDVKDVIEYSRLRGIRVVPEFDTPGHTASWGAGLPGFLTPCYDGSTPNG
KYYAANPMLNTTYDYMTKLLQEVKDVFPDKHVHLGGDEVNFNCWKSNPDITKFMEKMGFG
TDYSKLEQYYIKNILDISTSIGRDYIVWQEVLDNGVQDKSTVGEVWFENPTIQAVLERLT
AKGYRVLLAAGWYLNHDVYNPGTDWADFYKLDPQVFNGTQAQKDLVIGGEACMWGEYVDG
TNLIARLWPRASAVAERLWSNKDVKNMADATVRMDEQRCRMVRRGLNAEPLHPGFCQFEY
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcctcagtacgatacaatgcgtgttcagcgtggtgttggtgttgttcgcctca
ccactgccttgcctcaatgtccgagcgtaccaaaggcccgtcatggtacaacagacgggc
aaagtcttgcctaagccgcaaatgatgacggtgtctgctgaagcctacactctggcgatg
tccagctttaaatttacatacggctcttcctccgagatgtgcgacatcgtggaccaggcg
tttaggcggtactatgatcttatattcgacgtcgatggaccgaagaaagctccaaaggta
cctgaaagcatggccgagctgactgtactacaggtcatggtgaaagagccatgcaaggga
gcctatcccagcttggagtcctcagaaaactacactctgacagttactgctccgatggga
atgctggttgctgattcagcatggggagtgttgagaggtttggagacattttctcagctg
atatacagaacagatgatggcacgatgatcatcaacaagactacagtagatgactttccc
aggtttgcccacagaggaatcctattggacacttcccgccattttattcccctcaagtac
atcaagcagaatttggatgcaatggcttacaacaagttcaatgtgttccattggcacatt
gtggatgaccagtccttcccatatcagagtgttgtcttccctgatctcagtgctaaggga
gcctttaatccttacacccacctgtacacgcaagaggatgttaaggatgttatagagtac
tcacggctgaggggcatcagggttgtgccagagtttgacacccctggccatacagcctcc
tggggtgcaggtctcccagggttcctcacaccatgttacgatgggtccacacccaatgga
aagtactacgctgctaaccccatgctgaacaccacgtatgactacatgactaaactgctg
caggaagtgaaggatgtgtttcctgataagcatgtccacctgggtggggatgaggtgaac
ttcaactgctggaagagtaatccagacatcaccaaatttatggagaaaatgggctttgga
acagactattccaaactggagcaatactacatcaaaaatatcctggatatctccacatcc
atcgggagagactatattgtgtggcaggaggtgctggataatggtgtgcaggacaaatca
actgtaggggaagtatggtttgaaaacccgaccatccaggctgtactagagaggctgaca
gccaagggttatcgtgtgttactggcagctggctggtatctgaaccatgatgtatacaac
cctggaactgactgggctgatttctacaaattagatcctcaagtgttcaatggtacacaa
gcccagaaagacttggtgattggtggagaggcctgcatgtggggagagtatgtggatggc
acaaacctgattgccaggctctggcctagggccagtgctgtcgctgagcggctgtggagc
aacaaggatgtgaaaaacatggcagatgcaaccgtaaggatggacgagcagagatgtcgg
atggtcaggagaggactgaatgctgaacccctccatccaggattctgccagtttgaatat
gactga
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