Branchiostoma floridae (Florida lancelet): 118409884
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Entry
118409884 CDS
T01074
Name
(RefSeq) low-density lipoprotein receptor-related protein 5-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04150
mTOR signaling pathway
bfo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118409884
04150 mTOR signaling pathway
118409884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118409884
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118409884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
SGL
Ephrin_rec_like
EGF
cEGF
DUF5050
HYR
Sushi
Motif
Other DBs
NCBI-GeneID:
118409884
NCBI-ProteinID:
XP_035667148
UniProt:
A0A9J7KNA2
LinkDB
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Position
2:complement(12857289..12921481)
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AA seq
1185 aa
AA seq
DB search
MTRDRLPWMLRYVCVLLAVLPHSSAARSGPASGKELNFLVYASGDTGEVVRLTPGRGGVW
TRAVIDRGIRPVAVDYDPVEQRVYWSDVENRCIKRVFLNGTGSEVFMTRFMGTVDGLSVD
VANRRLYFSNMNSVRAGTWISSWQRIEMVDLDRRNRKRVIETDLDKPRAVVVHRGFLYFS
DWGSQPRISRADLDGGNRVTLQSANVYNPNGLATDGRALFWTDARLALDSAASIEKSSLL
GGNRTTVNFRVKVPFGITLGDGYVFFSDWDERAIFRGNMRNGEIVSVVKNISHPMGLQFY
KGPQYVDLTARNPCDNSDCSHICVPTRGGYRCQCPDVGGLVLTDDGKRCVEPDNFLLVAD
YNEIRMLSFDTRDTTAYPIIQLDGAPNIVALTYDPEEKFVYWSSVNTGMVSRGRLTGEEI
SYVKLFGGGIDGMAIDVDGRTLYWSDGIAGTIEMLDLGTFAHKVAVKDVDKPRAITMDPI
RSYLFWSDWGKEPKIERASLSGGNRTTLVGRDLESPNGLAVDADEGRLYFADGTLRKIES
IAEEGGNRREVAAISQKMDHIYGLAKVGPALFYSDWKTQSVAMTDLVTGRIDKVITDLIR
PTEIHAHHPKELKVSGMCATGRSPCSHTCVSVPGGVRCACPVGMRVAADRVTCVDDTSTP
SNDVTTSLNEISTNSMETTTLLDKTGTPGPVLACPPDVMKEVPRAPVMITWKQPRLVGNG
AILMAECSRKPGLFYRGSTAVTCWVVDSKGTKNTCRFNVSIIVKTVECPPVLSPTNGNYT
CKIAKTGKQRCRMECQERFSPYPDAKFTCTPMGEWRDPIPLCIGDVERPKMFRRLISFFL
PVPCQSISSVLPLDITGKLLNYIVPLEPCKPLSRDASCLSVKASCSAGYVARRRRQAGPP
ENGVAVNMTVTINARQDSIRLRRLENSTTERILRLLRTGNFSYDNGNRVYRIDADGVVVS
DVNVLCDYGRMKISKGCVRCPPGTFYNETANLCQYCVLNNYQPNPGQTSCRLCPWGTGTA
GVGAFDIKQCDRSNLPATERPRNSENTIPTYLLNNKGPGVLLFLYIAAGCVGFILLSAAL
AAICYPPSMGDPNRSNDKKNEMAGNCVQPTMTTLTRKNRAFGWDDEGETDNREKDQSTST
FQTGRKWREGGKSSQLEGAPSRDVNLYYNETKRSQKVTYLKQNNF
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgaccggctgccgtggatgctgcggtacgtctgcgtcctgctggcggttcta
ccccactcctccgccgccaggagcgggccagcctccggcaaagagctgaatttcctggtg
tacgcgtctggtgacaccggggaggtagtccggctgacgcccgggcggggaggcgtgtgg
acccgagcagtcatcgaccgcggcatccgacctgtggcggtcgactatgatccagtggaa
cagagagtgtactggagtgacgtggagaacaggtgcatcaaacgtgtctttctgaacgga
accggaagtgaggtcttcatgacaaggttcatgggtacagtcgacggcctgtctgtagat
gtagcgaacagacggctgtatttctccaacatgaactccgtccgggccggcacgtggatc
agctcctggcagcggatagagatggtggacctggaccgccggaaccggaaacgcgtcata
gagaccgacctggacaaacctcgggctgttgtagtgcaccgtggattcctgtatttctct
gattggggcagccagccgaggatcagccgggcggacctggacggcgggaaccgcgtgacg
ctacagtccgctaacgtgtacaaccccaacgggctggccaccgacgggcgggcgctgttc
tggacagacgcacgactggcgctcgactcggcagcgtctatcgagaagtcgtcacttctg
ggagggaacagaaccaccgtgaactttcgtgtgaaggtaccgttcggaatcacactgggt
gacggttacgtgttcttcagcgattgggacgagcgggcgatcttccgcgggaacatgcgt
aatggggaaatagtttccgtcgtcaagaatatctcacatcctatggggctgcagttctac
aaaggaccacaatatgtcgatctaacagctcgcaacccgtgtgacaacagcgactgtagc
cacatctgtgttcccacccgtggaggctaccgctgccagtgcccggatgttggagggttg
gtactgacggacgatgggaagagatgcgtagagcctgacaacttcctcctggtggccgac
tacaacgaaatacgcatgctctccttcgacacacgtgataccaccgcctatcccatcatt
cagctggacggtgcgccgaacatcgtggccctgacctatgacccggaagagaagtttgta
tactggagcagcgtgaacacaggcatggtgtcacgtggccgactgacgggagaggagata
tcctacgtcaagctgttcggagggggcatagacggaatggcaatcgatgtagatggaagg
accttatactggtcagatgggatcgcagggaccatcgaaatgctggatctgggcacattt
gcacacaaggtcgcagtcaaagatgtagataaaccacgtgccattaccatggacccgatc
agaagctacctgttctggtcggattgggggaaagagccaaagatagagcgggcctcgctg
tctggcggaaaccggaccaccctggtcggcagggacctggagtcgcccaacggcctggca
gtggacgctgacgagggcaggctctacttcgccgacggcacactcaggaaaatagagtcc
atcgctgaagaaggaggaaatcgccgagaagtggcggccatatctcagaagatggaccac
atctacgggctggcgaaggtgggccccgccctgttctactccgactggaagacccagtcc
gtggccatgactgacctggtgacgggcaggatagacaaggtcatcacggacctcatcagg
cccacggagatacatgcgcatcatcccaaagagctgaaagtgtcgggtatgtgtgccact
ggccggtccccctgctcacacacctgtgtgtctgtaccgggaggagtcaggtgtgcatgc
ccagtcggcatgagggtagcagctgacagagtcacgtgtgttgacgatacttccacaccc
agtaatgacgtcactactagtctcaatgagatctcaaccaactcaatggaaacaaccaca
ttactggacaagacaggaacaccgggccctgtgctggcctgtccgcctgacgtaatgaag
gaggtgcccagagcgcctgtgatgatcacgtggaaacagccacgactggtggggaatggg
gccatcctgatggcggaatgttccaggaaacccggactgttctacagaggaagcaccgcg
gtcacgtgctgggtcgttgattccaaaggaaccaaaaacacctgcaggttcaacgtcagc
atcatcgtcaaaacagtcgaatgtccgcctgtactctctccgaccaacggtaattacacc
tgtaagatcgccaagacagggaagcagcggtgccgcatggagtgtcaggagagattctct
ccttaccctgacgccaagttcacatgtacacccatgggggaatggagggaccctatacct
ctctgcataggtgacgtcgaaagaccaaagatgtttcgccgactcatatccttcttcctc
ccggtcccatgtcagagcatttcctctgttctgcctcttgacatcaccggtaaattactc
aactacatcgtgccgctcgagccgtgcaagcccctgtcccgggacgccagctgtctctca
gtcaaagcttcgtgcagtgcgggatatgtcgccaggaggcgcaggcaagccggtccacca
gaaaacggcgtggcagtgaacatgaccgtcaccataaacgcacggcaagactcgattaga
ctgagaagactggaaaattccacaacagaaaggatattgaggctattgagaactggaaac
tttagctacgacaacgggaacagagtttataggatcgacgcagacggtgtggtcgtgtct
gatgtgaacgtgctgtgtgattatggcaggatgaagatcagtaaaggatgtgtgaggtgt
ccgcccggtacattttacaacgagaccgccaacctgtgtcagtactgtgtgctgaacaac
taccagccgaaccccggccagacgtcctgccgactctgcccctggggcacgggcaccgcg
ggggtgggggcgttcgacatcaaacaatgtgatagaagtaacctcccagccaccgagaga
ccacggaactccgagaacaccatcccgacctatctactcaacaacaagggcccgggagtt
ctgttgttcctctacatcgccgccgggtgtgtggggttcatccttctgtccgccgcgctg
gcggctatctgttacccgccttctatgggagatcctaacaggagtaacgacaagaaaaac
gagatggcgggaaactgtgtacagccgaccatgaccaccctgacccgcaagaacagggca
ttcggatgggatgacgagggggaaaccgataacagggaaaaggaccagtccacctcaact
ttccagacggggaggaagtggcgagagggcggaaagtcgtctcagttagaaggggcgccc
tcccgcgacgtgaacttgtactacaacgagactaaaaggtcgcagaaagtaacatatctg
aagcagaacaacttttga
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