Branchiostoma floridae (Florida lancelet): 118409916
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Entry
118409916 CDS
T01074
Name
(RefSeq) AP-3 complex subunit beta-1-like isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118409916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118409916
Membrane trafficking [BR:
bfo04131
]
Endosome - Lysosome transport
Others
AP-3 complex
118409916
Endosome - Golgi transport
118409916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
MOR2-PAG1_C
Spectrin
Motif
Other DBs
NCBI-GeneID:
118409916
NCBI-ProteinID:
XP_035667194
UniProt:
A0A9J7KNE5
LinkDB
All DBs
Position
2:complement(22315341..22353370)
Genome browser
AA seq
1073 aa
AA seq
DB search
MSNGGGSYNAQNDSRAGSTGEPDIGTEPTGGFFSADYKKHDDLKQMLDSNKDNLKLEAMK
RIVGMVAKGKDASDLFAAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSIATFQRAL
KDPNQLIRASALRVLSSIRVPVIVPIMMLALKDSVVDMSPYVRKTAAHAIPKLYSLDPEQ
KDQLIQVIEKLLADKTTLVVGSAVMAFEELCPDRIDLIHKNYRKLCNLLVDVEEWGQVVI
INMLTRYARTQFLDPNQQDAVADDDKNFYGDEDEKDSEEEEDDDEKEKTPPKKPYMMDPD
HRLLLRNTKPLLQSRNAAVVMAVAQLYHHIAPKSEVGLVAKALVRLLRSHREIQHVVLSN
VATLTTIRKVRGMFEPYLKSFFVRPSDPIHVRTLKLEILTNLATETSISTILREFQTYVT
SSDKDFVAATIQAIGRCASSISEVTETCLNGLVGLLSNRNEYVVAESVVVIKKLLQMQPD
SHSEIIQHMAKLADSITVPMARASILWMVGEYSDRVPKIAPDLLRKMAKNFINEEDIVKL
QILNLAAKLCITNPKQTKLLCQYVLNLAKYDQNYDIRDRARFIRQLVSPAGEKGALGKHA
KKIFLASKPAPVLDSSFKDRDQWQLGSLSHMINQRASGYSPLPDYPETAPDPTVRNVEVN
PWEQVPMPWAEKTHKKKAGKPKKEAFYSDEEEESESESDSEESSSSSSESGSESESDDDS
KSESGSDKEKKSDEEPESSSSSSSESESSSESESESESESEPDTKPQKKTPPPKTKSSAK
PKKEAKQEVSLLDLDVIDMSSTSAPVPAPASALDVLSPSLASDLQGLSINDKKDTAISVT
TPMFVSTTSHELLHRMTGEGLAANYRFTRGTCIYSTSMVPVEVTFTNHTDSPVCNIRIGD
KKLQAGMTLQEFPEIPSLPGGGSMSVSIGIDFKDTIQPANFQICTQDRKYNVSIKPPVGE
LFQAVTMSEADFTAQQSKLTGMNENSGKVSIPSQHNNSKTITARMSELANVAPVSSSQDG
LYRFAGKTVSGGTLLLVTVKVGEDNSANITVNCELMAICSMLVKEVKQKLSQA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacggcggagggtcgtacaatgcccagaacgacagccgggcgggctccactggt
gagccggacatcggcaccgaacccaccggcggcttcttctctgcggattacaagaagcat
gatgacctaaagcaaatgctggacagcaacaaggataacctgaagttggaagcgatgaaa
agaatcgttgggatggtggcaaaaggcaaggatgcatcagacctctttgcagctgtggtg
aagaatgtggtgtctaagaacattgaagtgaagaagctggtgtatgtgtacctggtgagg
tatgctgaggagcagcaggacctggcactgttgtccattgcaaccttccagagagcactc
aaggaccctaaccagttgatccgagcgagcgccctgcgtgtgctgtccagtatacgtgtg
cctgtcatcgtccccatcatgatgctggcactgaaagactcagtggtggacatgtcgccc
tacgtcaggaaaactgctgctcacgccatccccaagctctacagccttgaccctgagcag
aaggatcagctaatccaggtcattgagaagctcttagcagacaaaacaacacttgtggta
ggcagtgcggtgatggcgtttgaggagttgtgtccggaccggatcgatctgatccacaag
aactaccgcaaactgtgcaacctgctggtggatgtggaggagtggggtcaggtcgtcatc
atcaacatgctgaccagatatgctcgcacacagttcctggatccgaaccaacaggatgct
gtagcagatgatgacaagaacttctatggtgatgaggatgagaaggatagtgaagaggag
gaggatgatgatgagaaggagaagactcctcctaagaaaccgtacatgatggaccccgat
cacagactccttctgaggaacaccaagcctcttctgcagagtagaaatgctgctgttgtg
atggcagtagcccagctgtaccaccacatcgcacctaagagtgaggtggggctggtggcc
aaggctctggtcaggctgctcaggagtcacagagagatccagcatgtggtgctcagtaac
gtggccaccctgacaaccatcaggaaggtaaggggtatgtttgagccctacctgaagagc
ttctttgtgcgacccagtgaccccatacacgtcaggacactgaagcttgaaattctcacc
aacttggccacagaaaccagcatctccaccatcctcagagagtttcagacatatgtgacc
agctcagacaaggactttgtggcggcgaccatccaggcgatcgggcggtgcgccagctcc
atctccgaggtgacggagacgtgtctgaacgggctggtcggcctgctgtccaacaggaat
gagtacgtagtggctgagagcgtggtggtcattaagaagttgctccagatgcagccagac
tcccactctgagatcatccagcacatggcaaaactggcagactccatcactgtgccaatg
gcccgtgccagtatcctgtggatggttggggagtactccgatcgggtcccaaagattgca
cctgacctgctcaggaagatggccaagaacttcatcaatgaggaggacattgtcaagctg
caaatcctcaacctggcagccaaactttgtatcaccaaccccaaacagacaaagctgtta
tgtcagtacgtgcttaacctggcaaagtacgaccagaactacgacatccgggatcgggcg
cggtttatacgccagctcgtgtcacccgcaggcgagaagggagcgctcgggaaacacgcc
aagaagatcttcctggcctccaaacctgcgcctgtgttggattcttctttcaaagatcgt
gaccaatggcagctgggctccctgtcccacatgatcaaccagcgggccagtggatactct
cctctcccagactaccctgaaacagcgccggatccgaccgtgcgaaatgtggaggtgaat
ccttgggagcaagtacccatgccatgggctgagaagacccataagaagaaagcaggcaag
ccaaagaaggaggccttctactctgatgaggaagaagaatcagagtcagagtctgacagc
gaggagtccagcagctccagcagtgagagtgggagcgaaagtgaaagtgacgatgacagt
aaaagtgagagtggaagtgacaaggagaagaaatcagatgaggagcctgagagcagcagc
agcagcagtagtgaatctgagagctcctcggaaagcgaatctgaaagtgagagtgaaagt
gaacctgacaccaaacctcagaaaaagaccccaccacctaaaactaagtcttctgcaaaa
ccaaagaaagaggcaaaacaggaagtgagcctgctggatctggatgtcattgacatgtcc
agtacatcagcgcctgtccctgctccagcctcagcgctggacgtcctgagtccttccctg
gccagcgatctccagggactgtccattaacgacaagaaggacacggctataagcgtgacc
actccaatgtttgtctccacgacgtcccacgagttgttacacagaatgacaggagaaggt
ttggcagccaactacagatttacccgcggcacgtgcatctactccacttccatggttcct
gtggaagtcaccttcaccaaccacaccgactcaccggtctgcaacatcagaataggggac
aagaaattgcaggctgggatgacattacaggagttcccggagatcccgtcccttcctggt
ggggggtccatgtctgtgtctatagggatcgactttaaggataccatacagcctgcaaac
ttccagatttgcacccaggaccgcaagtacaacgtcagcatcaaaccaccagtaggagaa
ctgttccaggcagtcaccatgtctgaggcggacttcacagcacagcaaagtaagctaacg
ggtatgaatgaaaactcgggcaaggtcagcatcccgtcccagcacaacaactccaaaacc
atcaccgcccgcatgtccgagctcgccaacgtcgctccagtctcctccagccaggacggg
ctctacagattcgcgggaaagacggtcagcggcgggacgttgctgctggtcacggtcaag
gtgggcgaggacaactccgctaacattacggtcaactgtgaactaatggcaatctgttcc
atgttagttaaagaggtcaaacagaagctgtcgcaggcgtga
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