Branchiostoma floridae (Florida lancelet): 118409971
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Entry
118409971 CDS
T01074
Name
(RefSeq) TATA box-binding protein-like protein 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118409971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118409971
03021 Transcription machinery [BR:
bfo03021
]
118409971
Transcription factors [BR:
bfo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
118409971
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118409971
RNA polymerase III system
TFIIIB
118409971
RNA polymerase I system
SL1/TIF-1B
118409971
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF4611
Motif
Other DBs
NCBI-GeneID:
118409971
NCBI-ProteinID:
XP_035667291
UniProt:
A0A9J7MGU8
LinkDB
All DBs
Position
2
Genome browser
AA seq
239 aa
AA seq
DB search
MAVAAASPDICQDIGNKNSVPGEPPAQEQTSLDIDIANVVCSFRARCHLNLRMIALNGAN
VIYKRELGKVTMKLRRPYCTANIWSSGKIVCTGARSEDDAKKGARRCARTLQNMGFQVHF
SEFKVVNVLGICAMPFTIKITLFSKHHKENASYEPELHPGVTYKIRDPKAVMKIFSTGSI
TCTAPCVANIQRAIEHIYPLVHEFRGDEVVRGPRRGAAGEGNIDDSEEEEDSEDDEEDD
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgctgcggcctcaccagatatttgccaggatatcggcaacaaaaactcagtt
ccaggggagccgcctgcacaggaacaaactagcctagacattgacatcgccaacgtggtg
tgcagctttagggcgaggtgccacttgaacctgaggatgatagctttaaacggggccaac
gttatctacaaacgggagctggggaaagtcacaatgaagctgagaagaccatactgcaca
gctaacatctggtcatctggcaagattgtgtgcacaggagccagaagtgaagatgatgct
aagaagggtgccagaagatgtgcaagaaccttacaaaacatgggattccaggtgcacttt
agtgagttcaaggtggtgaatgtgctggggatatgtgccatgcccttcaccatcaaaatc
accctcttttccaaacaccacaaggaaaatgcaagctatgagccagagctccacccagga
gtgacctacaaaatcagggaccccaaggctgtgatgaagattttctctacaggcagtatt
acatgcacagcaccctgtgtggctaacatccaaagagctatagaacacatctatccattg
gttcatgagttccgaggagatgaggtggtacggggtccgcgaaggggtgctgccggggag
ggtaacatcgatgatagtgaagaagaggaagacagtgaggatgatgaggaagatgactga
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