Branchiostoma floridae (Florida lancelet): 118410105
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Entry
118410105 CDS
T01074
Name
(RefSeq) deubiquitinating protein VCIP135-like
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bfo01002
]
118410105
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118410105
Enzymes [BR:
bfo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118410105
Peptidases and inhibitors [BR:
bfo01002
]
Cysteine peptidases
Family C64
118410105
Ubiquitin system [BR:
bfo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
118410105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
DUF5817
Motif
Other DBs
NCBI-GeneID:
118410105
NCBI-ProteinID:
XP_035667499
UniProt:
A0A9J7KP81
LinkDB
All DBs
Position
2:25525202..25534995
Genome browser
AA seq
1379 aa
AA seq
DB search
MLPRSKSRETYRVLSGHCPDQNCRAKLFFPAWDSSIECTDCGQRHQQSAIQNVEEVTNPD
VALHNMLRNVLLSNTKPKKGADTVRVLGLSNYQCKLLSPLLTHYGMDKQSGKAKRLRDMN
QPDTFDCVLLGDRAFQIAPEHVEIVGYGRDRSGSMQYLHDTLDAMKKVNDKEERLIPIHA
DGDGHCLVHAISRALVGRELFWHALRENLKAHFIKNLEQYKALFHDFIDSNEWDDIIEEC
DPDFTPRDGEPLGLRNIHVFGLANVLHRPIILLDSLEGLQSSADYSGTFVPGLIPPEKCK
GKDGALNKPLCLAWSSSGRNHYISLVGIRGRPLCKLPMWLIPKLWGVPQDLLTKYVEFDS
EQRCAIGGSRSLPETYIQRLARAMEDVFMEKYQVHPSVVSDMHHYVFKRTGVVGVQPEVV
TEATQSAIRNERLYRCLTCDAVMEYSVGSDLLKRGGTLYQLAVRTHGKLQVGKNYHFPLQ
SLICKYDPVKDVLVPDMKMSRLTTCSWCQGTSVRLVCPDGSVVYLNGDRTHTAAENSQCG
CGFKHYWDGKEYDNLPELIPVTLEWGGKTIQEKVYWFQYETDTSLNSNVYEVATALVHKH
FPGEFGSERLVKCVVDVILQQTAKKEVYKPVSLEGMPGHEREGEPRQQDALDPSSPSKII
LTGHKHKTIHKEELTMSEAERMVQRKITDKAAHEQKKKSDEMAKRRAEKELKQLKQQQAA
AHQQSKPVAKVGPMVTTPPPRPSTPPTEKKVRVTTSEGKQVMLTLAISTTFQELQARIAS
ELGVSEDRQRIRYGFPPRPLAPPKPGMEGEPVPLQHGDKVTVDVLPPPAGEGQEEGAGAA
AKGAPMAVAGSPRRVQGMEASGASASQDPESALRDQLMNVLDQQLESNASSIDLQISSLS
ALAMLSGKDLWSFVQTMPQLFSREGVFTKKVGQDLGLADGKHCTLPSFPGKTFMFNGQAG
RLELCLEPQGHFPIGPGIDDVIAQNKQTREAYDPKAFSHVKEALHVGGSGVIVSKSEALK
VRAFAGKGQTLGGTSQPQPSTSTATDVPASAAVFIPDVVQTQSSAEGAVAQPPVGTKPQP
VAMEDDDYFLVESGEEDEGEEEISDKDDSLSTMKKAPGVTVIGSGAAAATMTTEQEALMA
KFAFTASAAMQAEQEVNEQEEEIKDSGGFRKVEIVIEDSKELAVAMETDRQEATGDDGKP
LEEHSGNVSEEVPKASETTDKNKPKTTEATECTSMDRSRTEGKTGDLDQVQAQNVLLEED
TSQGTEVNNTRDKVAVVEAARTETEMMDTSAAENTERGAGDKLDSSPEHVAVDVPTQGVH
RSEPVSEVTQARNTTGDQKEPEKKDSPMEVEPGKQAAQEGDGRPSGEGKEDAGEAMDSS
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgctgccaaggtcaaagtcacgcgagacataccgggtgctgagcggtcactgccctgac
cagaactgtcgcgctaaattgttcttccctgcgtgggactccagtatagagtgtacggac
tgtggccagaggcaccagcagagcgccatccaaaatgtggaggaggtcaccaacccggac
gtcgctctccacaacatgctccgtaacgtcctcctgagcaacaccaaaccaaagaaaggg
gcggacacggtacgtgttctcggactctccaactaccagtgtaagctgttgtctcccctg
ctaacccactacgggatggacaaacagtcggggaaagcaaaacgtctcagggacatgaac
cagccagacacatttgactgtgtgctgctgggggatagagccttccagattgcgcccgaa
catgtggaaatagtcggctatggccgggaccgctctgggagcatgcagtacctccacgac
accttggatgccatgaagaaggtaaatgacaaggaggagcggctcatacccatccatgcc
gatggggacggccactgcctggtgcatgccatctctcgggcacttgtgggtcgtgagttg
ttctggcacgccctcagagaaaacctcaaggctcacttcatcaaaaatctggagcagtac
aaggctctcttccatgactttattgacagtaatgaatgggatgacatcatagaggagtgt
gatccagacttcacacccagagatggggagccccttggcctgaggaacatccatgtgttt
gggctggccaacgttctccatcggcccatcatactgctagactccctggaagggcttcag
agttcagcggactactctggcacatttgttccgggactgatcccccctgaaaagtgcaaa
gggaaggatggtgcgctcaacaagccgctctgtctggcgtggagtagttctgggagaaac
cattacatctctcttgtgggcatccggggtcggccactctgcaaactccccatgtggctg
atccccaagctgtggggcgtcccgcaggacttgttgacgaagtacgttgagtttgacagt
gaacagcgttgtgcaatcggaggaagtcgtagcctccccgaaacctacatccagcgcctg
gcccgagcaatggaggatgtcttcatggagaagtaccaggtccatccctccgtagtgtca
gacatgcatcactatgtgttcaagaggacaggagtcgtgggtgtgcagcctgaggtggtg
actgaagccacgcagagtgccatccggaatgagcggctctaccgctgtctgacctgcgat
gctgtcatggaatacagcgtaggatctgacctcctaaaacgaggtggcacactctatcaa
cttgcagtcaggacccacgggaagctccaagttggcaagaactaccactttcccctgcag
agtctgatctgtaagtatgatcctgtcaaggacgttctcgtcccagacatgaagatgagc
cgcttgaccacctgcagctggtgtcagggaacgtcagttcgtctggtctgcccggatggc
tctgtggtgtacctgaacggggacagaacccacactgctgctgaaaacagccagtgtggc
tgtgggttcaagcactactgggatggcaaggagtatgacaatctacctgagctgatccca
gtaactctggagtggggagggaagacaatccaggagaaggtttactggttccagtatgag
acagacacgtctttgaacagtaatgtatatgaagttgctacagctttggtacacaagcac
tttcctggtgaatttggcagtgagagacttgttaagtgtgtggtagacgtgattctacag
caaacagctaagaaggaggtgtacaaaccagtctcactggagggcatgcctggccatgaa
agagaaggggaaccgaggcaacaggatgctttagacccatcctcaccatccaaaattatc
cttactggacataagcacaaaacaattcacaaggaagagttgacaatgagtgaagcagaa
aggatggttcagagaaagatcactgataaagctgcccacgaacagaagaaaaagtctgac
gaaatggcaaaaaggagagcggagaaggaactcaagcagctcaaacaacagcaagccgcc
gctcaccaacagtcaaaaccagtagccaaagtaggtccgatggtaacaacccctcctccc
aggccatccactcccccaacagagaagaaagtgcgggtcaccacatcagagggcaagcaa
gtcatgctaaccctagcaatatcaacaaccttccaagagttgcaagcaagaatagcctct
gagctaggagtttctgaggacagacagcgcatcaggtatgggtttccgccccgaccgctg
gctcctcccaagccgggtatggaaggtgagcctgtaccactgcagcatggggacaaggtt
actgtagatgtcttgcctcctcctgcaggtgagggacaggaggaaggggctggagcggca
gccaagggggcccccatggcagtagcaggctcccctcgacgtgtgcaggggatggaggcc
agtggtgcctctgccagtcaggacccagagagtgccctgagagaccagctcatgaacgtg
ttagaccagcagctggagagtaatgctagctctatagacctacagatttcctccctctcg
gccttggccatgctctcggggaaggacctctggagcttcgtgcagacaatgccacagctg
ttctctcgggaaggtgtcttcacaaagaaagtgggacaagacctagggctggcggatgga
aaacactgcactttgccgagcttcccaggaaagacatttatgttcaacggtcaagctgga
aggttagagctgtgccttgagccgcaagggcatttccccattggccctggcattgatgat
gtcatcgctcagaacaaacagacacgagaagcatatgatccgaaagccttcagccatgtc
aaggaagccttgcatgttggtggcagtggagttatcgttagtaagtctgaggccttgaaa
gtgagagcatttgcaggtaaggggcaaaccctaggtggcacctctcaaccccaaccctcc
accagtactgctacagatgtgcctgcaagtgctgcagtctttatacctgatgtagtgcag
actcagagtagtgcagagggagctgtggcacagccacctgtgggtacaaagcctcagcca
gttgccatggaagatgatgactatttcctggtggagtcaggtgaagaggatgagggagag
gaagaaatttctgacaaagatgactccttatcaactatgaagaaagctccaggtgtgact
gtgataggcagcggagcagcagcggctaccatgacgacagaacaagaggcactcatggcc
aagtttgcattcacagccagtgctgcaatgcaggcagaacaagaggtcaacgaacaggaa
gaagagattaaggactcagggggtttcaggaaggttgagattgtgattgaagattcaaaa
gaacttgcagttgccatggagacagataggcaagaggccacaggggatgatgggaagcca
ttggaggagcattctggaaatgtttctgaggaagtacccaaagcatccgagactactgac
aaaaacaaaccaaagacaacagaagccactgaatgtactagtatggacagaagtagaact
gaggggaaaacaggtgatttggatcaagttcaggctcaaaacgtattgttggaagaggat
acctcgcaaggcacggaagtgaacaatacccgagacaaagttgcagtagtagaagctgca
aggacagaaacagaaatgatggacaccagtgctgctgaaaatactgaaaggggagcaggt
gataaactagacagctctccagaacatgttgcagttgacgtgcctacacagggtgtgcac
agaagtgaaccagtgagtgaggtcacacaggcaagaaacactactggggatcaaaaagaa
cctgagaaaaaggacagtcccatggaagtagagccaggcaaacaagcggctcaagaaggt
gatggaagaccgtctggagaaggtaaagaagacgctggggaggccatggactccagctga
DBGET
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