Branchiostoma floridae (Florida lancelet): 118410364
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Entry
118410364 CDS
T01074
Name
(RefSeq) m7GpppN-mRNA hydrolase-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118410364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118410364
Enzymes [BR:
bfo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
118410364
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118410364
mRNA degradation factors
5'-3' decay
Decapping complex
118410364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
118410364
NCBI-ProteinID:
XP_035667943
UniProt:
A0A9J7KPS6
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Position
2:28608941..28614951
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AA seq
425 aa
AA seq
DB search
MEMSTVAIPTDVLDDLCSRFIINIPSEERDDLIRVCFQIELAHWFYLDFFRQERPELPSC
GMRDFSSIIFKHCPFLNDHVDTVDNIMAEWRSYKMSVPTYGGILLDESLENVLLVQGYLA
KASWGFPKGKVNKDEPEDTCAIREVLEETSFDITPLLDPEAYIEHRMNEQLVRLYIVAGV
SMETDFKPKTRKEIKCLKWFRVEDLPAHKKDTTPKTNLGLSPNNFFMVMPFIKTLRKWIT
TRKKAGSSLPPSKHLTDTAVAKTASSTTNMNRSQKGRKQDTAPDGTPEKDGLVALTDRHR
AQQQLYFAQQSQKEFEEYLNFKEPPTRASRRHKHSEGDGQTPDRKGKGKKKSSGQHNGRA
DRKRIDDLFADAMTTYTATSSSDNKDIPKFSSPAFLNFKFDRSAIFASYNVHNRHGGSRS
RHGKD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtcgacggtggccatacctaccgatgttttagatgatctttgtagtcgtttc
atcatcaacatccccagtgaagagagagatgacctgatccgggtgtgtttccagatcgag
ctcgctcactggttctacctcgacttcttccgacaggagcgaccggagctgccgtcctgt
ggcatgagggatttctcctcaattatcttcaagcactgtcccttcctgaatgaccacgtg
gacactgtggataacataatggctgagtggagaagttacaaaatgagcgttcctacatat
ggtggcatccttcttgatgaatcacttgaaaatgttttacttgttcaaggatatctagcc
aaagccagctggggttttcctaagggtaaagtgaacaaagatgagcctgaggacacttgt
gctatcagagaggttttagaagagaccagctttgacatcacaccactcctggatccagag
gcgtacatcgaacacaggatgaacgaacagctggtccgactgtacattgtggcgggggtt
tccatggaaacagacttcaaacctaagacacgaaaggagatcaagtgtcttaagtggttc
agagtggaggacctaccagcgcacaagaaggacaccacacccaaaaccaacctcggcctg
agccccaacaacttcttcatggtcatgccattcatcaaaactttgagaaagtggatcaca
actagaaagaaagccggtagctcactgccaccctccaaacacctcacggacacagcggta
gccaagacagcgtcgtcaacaaccaacatgaatcggagtcagaaaggcagaaagcaggac
acagcgcccgatgggaccccggagaaagacggtctcgtcgcgctgacagacagacatcga
gcgcagcagcagctgtacttcgcacagcagagccagaaggagtttgaagaatacctgaat
tttaaggagccacctacacgagcctcacgcaggcacaagcacagtgagggagatggacag
acccctgacaggaagggcaaaggaaagaagaagtcatctggccaacataatggaagggca
gataggaaaagaattgatgatctctttgcagatgccatgaccacctacactgcaacatca
agttcagataacaaggacatcccaaagttctcctcccctgctttcctgaacttcaagttt
gacagatcagccatctttgccagctacaatgtacataataggcatggcgggtccagatca
cggcatggcaaggactga
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