Branchiostoma floridae (Florida lancelet): 118410408
Help
Entry
118410408 CDS
T01074
Name
(RefSeq) WASH complex subunit 5-like
KO
K18464
WASH complex subunit strumpellin
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118410408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118410408
Membrane trafficking [BR:
bfo04131
]
Protein recycling
Others
WASH complex
118410408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
RIN1
Motif
Other DBs
NCBI-GeneID:
118410408
NCBI-ProteinID:
XP_035667998
UniProt:
A0A9J7KQ00
LinkDB
All DBs
Position
2:23371856..23383927
Genome browser
AA seq
1161 aa
AA seq
DB search
MDFLAEDNLCGRTLLRLVSRGNAIIAELLRLSEFIPPVFRLDNKRDQEVYGDIITDFSYF
RQQDYFDHNIEKRPDLQDLDEQFRENNIDILTRFYLAFESIHKYVTDLNRYLEDLQEGVY
IQQTMESVLLNEDGKQLMCESLFLYGTMLLAVDMKFEGVIRERMLVSYHRYSSARAVTDS
NIDDVCKLLRSTGFNPAPGAKKPANYPESFFKRVPIRPVFISMVIGRLRSDDIYNQISAY
PLPEHRSTALATQASMLYVILYFAPEILHNQQAKMREIVDKHFPDNWVVSVYMGIIVNLV
EAWDGYKAAKTALNNTTEQANVREQAMKYEQCVTKLNPLVKQQLKEGVLTEEFVLDSIPK
LMNIIRECNVTIHWMLLHTVESGADLNKRCRQLREQVIADSKYNPGILFELLLNTAQLEL
KLKEMFKQMLQDKQNKWEQCKKEGSERVAELGEVFSGTKPLTRVEKNENLQAYFNETAKQ
ITSLSYEDSTSAGRKIVQLIQALEEVQEFHQLEANLQVRQFLADTRKFLHQMIRTINIKE
EVLITMSIVGDLSYAWNIIDNYTGHMQQGIKRDPSLVTKLRATFLKLASAMDLPLLRINQ
ANSPDLISVSQYYSGELVTYVRKVLQIIPETMFGLLGVIIKMQTSQIKEVPTRLEKDKLK
EYAQLEERAKVAKLTHDISVFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAYAL
HQGLIFNPKSKVSELIPRLNGMGAVMDGFRRSFEYIQDYVSISGLKIWQEEVSRIINYNV
EQECNSFLRIKVSDFQSLYQSKDIPIPKFAPVDASVNFIGRLAREILRITDPKLTTYIDQ
MTAWYDNKTKQEIMTNRLFTKVQKSLGTFGLTGLDRLLCFMIVRELQNFLAVLQRGVMRD
KSWLDMFASLMKSLNPVRGIVANATKVYPQACTKASKMWQLFLEVILKVGQIQLLRRQIA
YELNFSCKFDSKFLACALQTFNESLLANIEAHYQDPSLPYPKEDNPLMFELTSYLECAGI
NNPLNKIYVTTQRLPYLSLLNFLFVISQLSRLQYVKAVGDLVCKKPTDGLDGVPFVVGTI
TLLKQFHKENTDHFLALLGQYVRSMVDSTASNSKSTGLSEEVVNVLAYLEMYMYYSELPR
KAVEAHIPSYLFDEFRSNVQT
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggacttcttggcagaagataacctgtgtgggaggaccctgctccgtctggtctcccgc
ggtaacgccatcatcgcagagctgctccgtctgtcggagttcatcccaccagtgttccgt
ctggataacaaacgtgaccaggaggtctacggtgacatcatcacagacttttcctacttc
cggcagcaggactactttgaccacaacatcgagaaacgaccagacttacaggacctcgat
gaacagttcagggagaacaatattgacatcctgaccaggttctatctggcatttgagagc
atccacaagtatgtcactgatctaaacagataccttgaggatctgcaggagggagtgtac
atccagcagaccatggagtctgtcctattgaacgaggatgggaaacagctgatgtgtgag
tccctgttcctgtatggcaccatgctgctggccgtggacatgaagtttgaaggggtcatc
agggagaggatgctagtctcttaccacaggtacagttctgcacgtgccgtgactgactcc
aacattgatgatgtctgtaagctgctgcggagcacaggcttcaaccctgccccaggtgct
aagaaacctgcaaactatccagaatccttcttcaagcgagtgcccatcagaccagtcttc
atcagcatggtgattggtcggctgaggtctgacgacatctataaccagatctcagcatac
cccctccccgagcaccgcagtacggcgctggccacccaggcgtccatgttgtacgttatc
ctgtacttcgcaccggagatcctccacaaccagcaggccaagatgagggaaattgtggac
aagcacttccctgataactgggtggtgagtgtgtacatgggcatcatcgtaaacctggta
gaggcttgggatggctacaaagctgctaaaactgctctgaacaacacaacagaacaggcc
aatgtcagggaacaggccatgaagtatgagcagtgtgtaactaagctgaaccctctggtg
aagcagcagctgaaggaaggtgtgctgacagaagagtttgtgctggactccatccccaaa
ctcatgaacatcatccgggagtgtaacgtcaccatccactggatgttactgcacactgtg
gagtcaggtgctgacctgaacaagcggtgccgacagctgagagaacaggtgatagctgac
agcaagtacaaccctggcatcctgttcgagttacttctcaacactgcacagctggaactc
aaattgaaagagatgttcaaacagatgcttcaggataaacagaacaagtgggaacagtgt
aagaaggagggatcagagagggtggctgagctgggggaggtgttctcaggaaccaaacct
ctcacaagggtggagaaaaatgagaacctacaggcatacttcaatgagacggctaagcag
atcacctccttgagctatgaagactccacctctgctgggaggaagattgttcaactcatc
caagctctggaagaggtgcaagagtttcaccagctggaggctaaccttcaggtgcgtcag
ttccttgccgacacgcgcaagtttcttcaccagatgatccgcaccatcaacattaaggag
gaggtcctcatcaccatgtctatagtgggagatctctcctacgcatggaacattatcgac
aattacacagggcacatgcagcagggtatcaagagggatccatctctggtcaccaaactc
agggccaccttcctcaagcttgcctcagccatggacctgcccctgctgcgtattaaccag
gccaacagtcccgacctgatcagtgtgtctcagtactactcaggagagctggtcacctat
gtcaggaaggtgctgcagatcatcccagagaccatgtttgggcttctgggagtcatcatt
aagatgcagaccagtcagattaaggaggttcccacccgtcttgagaaagacaagctgaag
gagtatgcccagctggaggagagagccaaggtggccaaactcacgcacgacatctcggtc
ttcaccgagggtatcctgatgatgaaaactacccttgttggaatcattaaggttgaccca
aagcagctgttagaggatggcatcaggaaagagctggtgaagagggtggcctatgcacta
catcaggggctcatctttaatccaaagtcaaaggttagtgagctcattccaaggttaaac
ggtatgggagcagtgatggacggattccggcggtcgtttgagtacatccaggactacgtg
agcatctccgggctgaagatctggcaggaggaggtctccaggatcatcaactataacgtg
gagcaggagtgcaacagtttcctcaggatcaaggtctctgatttccaaagtctgtaccag
tctaaagacattccaatccccaaatttgcacctgtggatgcatcggtcaactttattggt
cgactggcccgagagatcctgcgtatcactgacccaaagttgaccacgtacattgaccag
atgacagcctggtatgacaacaagaccaagcaggagatcatgactaacaggctcttcacc
aaagtacagaagagcctgggtacgtttgggctgacgggtctggaccgtctgctgtgcttc
atgattgtgcgcgagctgcagaacttccttgccgtgctgcagcggggagtgatgcgcgac
aagtcgtggctggacatgttcgccagtctcatgaagagtctcaaccctgtcaggggcatt
gtggccaatgccaccaaggtgtacccacaagcctgtaccaaagccagtaagatgtggcag
ctgttcttggaggtcatcctgaaggtcggacaaatccagctgctgaggagacagatcgcc
tacgagctcaacttctcctgcaagtttgactccaagttcctggcttgtgcactgcagaca
ttcaatgagtctcttctagccaatatagaggcccactaccaggacccatccctgccttac
cctaaggaagacaacccactcatgtttgagctgacatcctatctagaatgtgctggcatc
aacaaccccctcaacaagatctatgtgacaacccagcggctgccatacctctccctgctg
aacttcctctttgtgatctcacaattgtcaaggctgcagtatgtcaaggccgttggtgac
ctggtgtgtaagaagcccacagatggtctggatggtgtgccgtttgtcgtcggcaccatc
accctcctcaagcagtttcacaaggagaacaccgaccacttcctggccctgctgggacag
tacgtcaggtctatggtggacagcactgccagcaactccaagtcgactggcctctcagaa
gaagtggtgaatgttttagcctacttggagatgtacatgtattacagtgagctaccaaga
aaggcagtggaagcgcacattcccagctatctatttgatgaattcagaagcaatgttcaa
acatag
DBGET
integrated database retrieval system
