Branchiostoma floridae (Florida lancelet): 118410608
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Entry
118410608 CDS
T01074
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 2
KO
K06248
chondroadherin
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118410608
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bfo00535
]
118410608
Proteoglycans [BR:
bfo00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
118410608
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_6
Motif
Other DBs
NCBI-GeneID:
118410608
NCBI-ProteinID:
XP_035668278
UniProt:
A0A9J7KQD3
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Position
2:1918663..1919947
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AA seq
218 aa
AA seq
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MAPNVLLTAILTTLLCTSCISDSCPNCRVIYEKCHPVKGTGSGREELCVTCDPSAEHLVR
DTIPRCTLLQKATTLFLRNFRLGYLSSADINHLKHLTHLYIQPGNLGLLDNQTFEGFECK
LYELFLSHNNLPYLGKGWLVEVLRFLNLDHNEIAYIEEGAFGVSDQCLATPALFLPWNKL
VEIKPGYFRHLCKLRVLDLRHNQISTIDKGTNDFNLLC
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaacgtcttgctaactgccatattgactacgctactgtgtacatcatgcata
tctgattcatgcccgaattgtcgggttatctacgagaagtgtcatccggtaaagggtact
ggatctggacgtgaagagctttgtgtcacctgtgacccttctgcggaacatctcgtcaga
gataccattccacgctgcacgcttcttcagaaagcgacaactttgtttctccggaatttc
cgtcttggctacctgtcctcggccgacatcaaccaccttaagcatctgacgcatctttac
atacaaccaggaaacctcgggctccttgacaatcagacgttcgaagggtttgagtgcaag
ctgtacgaactgtttctgtctcataacaaccttccgtatctaggaaaggggtggcttgtc
gaagttcttcgttttctcaacttagatcataacgaaatagcttatatagaagagggggca
tttggtgtcagtgaccaatgcctcgcgacgccagctctatttctgccgtggaacaagctc
gtggaaatcaagccaggatacttcagacatctttgtaagctgagggtcttggatctacga
cataaccaaatttccaccatcgacaaaggtaccaacgacttcaatttattgtgctag
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