Branchiostoma floridae (Florida lancelet): 118410643
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Entry
118410643 CDS
T01074
Name
(RefSeq) ubiquilin-1-like isoform X1
KO
K04523
ubiquilin
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118410643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118410643
03051 Proteasome [BR:
bfo03051
]
118410643
Membrane trafficking [BR:
bfo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
118410643
Proteasome [BR:
bfo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
118410643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
Rad60-SLD
UBA
Ubiquitin_5
MUCL1
UBA_7
CUE
Rad60-SLD_2
OTU1_UBXL
UBA_HOIP
Dsc3_N
UBA_NBR1_C
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
118410643
NCBI-ProteinID:
XP_035668324
UniProt:
A0A9J7KRT5
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All DBs
Position
2:16702301..16711630
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AA seq
585 aa
AA seq
DB search
MAESEDSGSELIKIVVKTPKSKETVEIEATSTITEFKEAISQKFGQPVEQLCLIFAGKIL
KDHETLEKIGIKDGLTVHLVIRQKVGSQQGPSASGSSAPAASSTPSAPAAAAAGTAPAAA
PQPAPAAAPFGVGGMGGLSGLQNLGMGSANFMEMQQRMQQELLRNPDMLTQMMENPFVQS
MMSNPDLLRNLIVSNPQMQQLMERNPEITHMLNNPELMRQTMELARNPAMLQEMMRSQDR
ALSNLESIPGGYNALRRMYTDIQEPMMNAAQEQFGNNPWASLVGGGTSNPQQGQENREPL
PNPWAPQGSSTTAATTSTTTASTTASSPAGQGLPGGLPGGIPTSGMFNSPGMQSLMQQMV
DNPQLMQNMLQAPYMQSMMQSMGQNPDMASQIIGNNPLFQGNPQLQEQMRQQLPTFMQQM
QNPEVQAAVTNPRVLQAIMQIQQGMQQLQAEAPVLLPGLGVPSPSVPPAGGMPASPAAPA
SSAASSSTDSTTSTTPTPTTASASTTSPSTAAPPTGPTEAQQQLLQQMLQTLAGGNAMQP
PEVRFRSQLEQLETMGFVNRAANIQALTATNGDVNAAIDRLLQAQ
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcggaagattctggaagcgaactgatcaaaattgtcgtcaaaactccaaaa
tctaaggagacggtggaaattgaggcaacttctacgataacagaattcaaggaggcaatt
tcgcagaaatttgggcagcctgttgaacagctgtgtctgatctttgcggggaagatcctg
aaggaccatgagaccttagagaagataggaataaaggatgggctgactgttcatctggtg
atcagacaaaaggttgggtctcagcagggtccaagtgcaagtggaagttctgctccagca
gcctccagcacaccctcagcccccgcagctgctgctgctgggactgcacctgcagccgct
ccacagccggctccagctgcagcaccatttggtgtgggtggaatggggggcctgagcgga
ctgcagaacctgggcatggggtctgccaacttcatggagatgcagcagagaatgcagcaa
gagctgctgcgtaaccctgacatgctgacccagatgatggagaacccgtttgttcagagc
atgatgtccaaccctgacctgctcaggaacctcatcgtcagcaacccgcagatgcagcag
ctcatggagagaaacccagagatcacccacatgttgaacaacccagagttgatgcgccag
accatggagctggccagaaaccctgccatgttacaggagatgatgcgcagtcaggacagg
gcgctcagcaacctggagagtatcccaggtggttataacgccctgcggcgcatgtacacg
gacatccaggagcccatgatgaacgcagcacaggaacagttcggcaacaacccatgggct
tcacttgtgggcggtggtaccagtaacccccagcagggtcaggagaacagagagcccctc
cccaacccctgggcaccccaaggttccagtaccacagccgccaccaccagcaccacgact
gccagtaccacggccagctcaccagcaggacaggggctgcctggaggcctgccaggagga
attcccacatcaggcatgttcaactccccggggatgcagagtcttatgcagcagatggtg
gataacccccagctcatgcagaacatgctgcaggcaccctacatgcagagtatgatgcag
tccatgggccagaaccctgacatggcttcacagatcatcggtaacaaccccctgttccag
ggcaacccacagctccaggagcagatgagacaacaactgcctaccttcatgcagcagatg
cagaaccctgaggtgcaggctgccgtcaccaaccctcgtgtgctgcaggccatcatgcag
atccagcagggcatgcagcagctgcaggcagaggcacccgtcctgctgccagggcttggt
gttccttctcccagtgttccccctgcgggtggtatgccggcctcccctgctgcaccagcc
tcctctgcagcatcctccagtacagactccaccacaagcaccacgcctactcctactact
gccagtgccagcaccacctctcccagtacagcagcgcctcctactggccctacagaagca
cagcagcagctcttacagcagatgttacagacactggcaggagggaatgcaatgcagcca
ccagaagtccggtttaggagccaactggagcaactagagacaatggggtttgtcaatagg
gcggcaaacatacaagcgctgaccgccacaaacggtgatgtaaacgcagcgatagacagg
ctactacaggcacaatga
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