Branchiostoma floridae (Florida lancelet): 118410647
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Entry
118410647 CDS
T01074
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118410647
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
118410647
Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
118410647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
TSP1_spondin
TSP1_CCN
VIR_N
Motif
Other DBs
NCBI-GeneID:
118410647
NCBI-ProteinID:
XP_035668331
UniProt:
A0A9J7MIS4
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Position
2:4342411..4425927
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AA seq
756 aa
AA seq
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MLDKCGVCGGDNSACQVVSGMFTRRHLPVGYNPLMRIPAGARHINITELAHSKNYIALKN
TKSKFYLNGKWEIDSPGTFKGAGTTFQYTRSTPHQRNRAGQTLLATGPTNEDLEVMLIYQ
QRNPGILYEYVLPSMPSVTPSPPPLPVTMRPSIYITKHTSDINKAIRHQGAANRDTQTSN
RHHGTGDRDSSVSDRHRVTADRDSSSSNRHHGTADRDSPPPNRHHVAVNRDSSPSEKADG
TSQSTGGRSRGSSVVPRGSVEGSLGGSNNAYIPGTSHQSIYRPGTSHIPGSSGGTSYQPT
GGVYLGGTAERTSEGTQYLPGSYRPGETFNNQNVYTGGSNRGGVNPSLDPSPRSPPGRTF
PEGVYTGTNLGPVEGVFQGSPQEFGPGRREFEWTVSGYTQCSRTCGRGVRTNIIQCIRRD
SAAVVLASNCDNRIRPPVQPVPCNTQPCPAFWDEGEWTPCSKTCGPGIKTRMVLCRQAIT
HSFTTTVSPRKCRSIPKPATSIMCQLGICSQWRIEGWGPCSVPCGRGQRTREVNCVTNTG
EVRPDAECNLRIRPRLAEDCDMGQCANSWFYSDWGKCSSDCGNGIQKRNVLCILSQDHDL
PLGSCDGKKKPSETQSCDMDSCNRNSAHWFSGPWGQCSAPCGEGTQERDVMCIEVNKREH
SHHIVSQHRCEQGTRPKHEQRCEVQPCTAMWYHTDWSQCSKSCDGGYRVRVVQCLDEKQQ
ISTKCNKALRPPDREPCSVKPCYIASSHGLRKIQFS
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgctggacaagtgtggggtgtgcggtggggacaactcggcctgccaggtggtgtcgggg
atgttcacgcggcgccacctccccgtgggctacaacccgctcatgcgcattcccgccggc
gcacgacacatcaacatcaccgagctagcgcacagcaaaaactacatcgccctcaaaaat
acgaaaagcaaattctacttgaatggcaagtgggagatcgacagccccggaactttcaag
ggcgcggggacaacattccagtacacaaggtcaacgccccaccagcgtaaccgggcgggg
cagacactgttagcaacaggaccaaccaatgaggacctggaggttatgctgatctaccag
cagagaaatccaggaatcctgtatgagtatgtccttccatcaatgccgagtgtcactccc
agcccaccccctcttcctgtcacaatgagaccttccatctacatcaccaagcatacttca
gacatcaacaaagcaatcaggcaccaaggcgcagccaacagggacactcagacttcaaat
aggcaccacggtacaggtgatagggacagctctgtttcagacaggcaccgtgttacagct
gacagagacagctcatcttcaaacaggcaccacggcacagctgacagggacagcccgcct
cctaacaggcaccacgttgccgtcaatagggacagctccccttcggaaaaagcggatgga
acgtcacagagtacaggtggcagatcgagaggaagttccgtggttccgcgagggtccgtg
gagggttcgttaggcgggtcgaacaatgcgtacattccgggaacctcccatcagagcatc
tatcgaccgggaacgtcccacatcccggggtcttctggaggaacgtcataccaaccaacg
ggaggggtgtacttgggaggaaccgcggagagaacgtcggaaggaacgcagtacctaccg
ggatcttacagaccaggagaaacatttaacaatcaaaacgtgtacacagggggctcgaac
agaggaggggtgaacccctccctggacccctccccacgttcaccccctggcagaacattt
ccagagggggtgtacacgggaacgaacttggggccggtggagggggtgttccagggttcc
ccccaggagtttgggccgggaaggagggagtttgagtggactgtttcagggtacacacag
tgcagccgcacctgcggaagaggggtacggacgaacatcatccagtgcatacggagagac
agcgccgccgtcgtgctggccagcaactgtgacaaccggatacgaccgcccgtccagccg
gtgccatgtaacacccagccctgcccagcattttgggacgagggagagtggacaccgtgc
agtaagacgtgcggccccgggatcaagacacggatggtcctgtgtcgacaggccatcacg
cacagcttcaccacgacggtctcccccaggaagtgtcgctccatccccaaacctgccacc
tccatcatgtgtcagctgggaatctgcagccagtggagaatagagggctggggaccgtgc
tcggtgccgtgtgggcggggccagcgtacgcgggaggtgaactgtgtaacgaacacgggg
gaggtccgtcccgacgccgagtgtaacctgcggatccggccgcgcctggccgaggactgc
gacatgggccagtgcgccaactcatggttctactccgactggggaaagtgctcctcagat
tgcggcaatggcatccagaagcggaacgtgctgtgtatcctgagtcaggaccatgacctc
cccctgggcagctgtgatgggaagaagaagccgtcggagacccagtcctgcgacatggac
agctgtaacaggaacagtgcacactggttctctgggccatggggacagtgctcagcgcca
tgtggagagggcacacaggagcgagatgtcatgtgtatcgaggtgaacaagcgggaacat
tcgcaccacatcgtgtctcagcaccgctgtgagcagggcaccaggccgaaacacgagcag
aggtgcgaggtacagccttgcaccgccatgtggtaccacactgactggagtcagtgttcg
aagtcgtgcgacggtggttaccgcgtacgtgtggtccagtgtctggacgagaagcagcag
atcagcaccaagtgcaacaaggcgctacggccgcctgaccgggaaccctgcagcgtcaag
ccttgctacattgcatcatcacatggtttaagaaaaattcagttcagttag
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