Branchiostoma floridae (Florida lancelet): 118410976
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Entry
118410976 CDS
T01074
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118410976
Transcription factors [BR:
bfo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118410976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118410976
NCBI-ProteinID:
XP_035668859
UniProt:
A0A9J7KR28
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Position
1:33583497..33584401
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AA seq
245 aa
AA seq
DB search
MSTNMMMHQERKEDEAAKKDHVKRPMNAFMVWSRIQRRKIAEDNPKMHNSEISRRLGEMW
KELSVEEKKPFVEESKRLRAEHMEKYPDYKYRPRRKLKTMMKNSSFPTMPGGMPPNYFPA
SNCSPPPALQMSMPEQYGHMNGYMSGYHSSMMRDPANPYSHQVIPSSAAATTAGSMPTRY
DMAALTYSTYASMPPTTSYTTSSCALQPYPVSSYPSTDFCAPVKPERTLPASYDDHIRPY
YSEHC
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccaacatgatgatgcaccaagagaggaaggaagacgaagcagcgaagaaggat
cacgtcaagcggcccatgaacgccttcatggtgtggtcccgcatccagcggcggaagatc
gccgaggacaacccgaagatgcacaactcggagatcagcaggcggctgggagagatgtgg
aaggaactgtcggtggaagagaagaagccgttcgtcgaggagtcgaagagactccgagcc
gaacacatggagaagtaccccgactacaagtaccgcccgcgccgcaagctgaaaaccatg
atgaagaactccagcttcccgaccatgccgggcggcatgccgcccaactacttcccggcg
tccaactgcagccccccgcccgccttgcaaatgagcatgccggagcagtatggacacatg
aacggctacatgagcggctaccactcctccatgatgcgggacccggccaacccgtacagc
caccaggtcatcccgtcttctgcagcggcgactacagcaggcagcatgccgaccaggtat
gacatggcggccctcacctatagcacctacgcttccatgccgcctaccacgtcctacacc
actagtagctgtgcgctccagccgtaccccgtctcatcctacccaagcaccgacttctgc
gccccggtcaagcccgaacggaccctccccgccagctacgacgatcacatccgaccgtac
tacagcgaacattgctga
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