Branchiostoma floridae (Florida lancelet): 118411145
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Entry
118411145 CDS
T01074
Name
(RefSeq) LOW QUALITY PROTEIN: elongator complex protein 1-like
KO
K11373
elongator complex protein 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfo03016
]
118411145
Transfer RNA biogenesis [BR:
bfo03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
118411145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_EML_2
Beta-prop_THOC3
WD40_CDC20-Fz
TPR_GEMI5
TPR_7
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_NUP159_NUP214
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
118411145
NCBI-ProteinID:
XP_035669084
UniProt:
A0A9J7KRC0
LinkDB
All DBs
Position
3:2642312..2684357
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AA seq
1386 aa
AA seq
DB search
MKNLELLQCVHQECIPASLGAPCCIAVDSDTGTVYAGTDTGLVALDGDSHSMLCSVSLRE
AGYLCETDNSHLVGIQYMYDQDSVCVATSSGDVILWNIPTQELECVGTVDSGLTCMAWSP
NQDLVLLTTGEEKMVMMTSDFNPISETSIHQEEFGEAEFITAGWGKKETQFHGSEGKQAA
FQQKESVSPALPWDDRRPRVSWCRDAFVVSSVSPVDGARRLRVWNRDCVLQATSENVSML
EQALSWKPSGSLIASTQRKPHRHEVVFFEKNGLRHGGFVLLFGKDEIKVLELLWNSDSTV
LAVWLEELSPVQEKGAGDEDKSFTPSTYVQLWTVSNYHWYLKQSLQFGKSLTDKPTAVVW
DAEHPYRLHLVCHGGRYVMYEWTWVINRSDGRTSDDNSYVAVIDGDKVLLTPFRQVVIPP
PMSAYSLQLPTPVSQVLFSPSPGVNDLAAVLTDGTVVFYTLDLKQPEEEVSGDTSVCVNA
AGGTGFKPAVRMHVQHRRLGLSCCISQEKWRCAQTLHHFVWLAEDQLLTVSWDPSSSTSV
LYHLGTQEEQATLLHQVAVEGRVYQLCRSSDGHSVAIELTDGTVFRYHIDKVAACPVLEP
WRSQDGVPVKFSVLCSQMGLCSMGGHETVLGLSDKFRLFINGDEISSNCTSFAVHNDHLL
LTTHAHTCACLPLHTASKDLSSAIDEKTRRVERGSRLITVVPWDTKVILQMPRGNLETVH
PRTLVLGLVQKMIDSQQFLEAFLVMRKHRVNLNLLCDLNPKVFLSCVPEMVTQLKDINFI
NLFLTELREEDVTKTMYSEYCCSPDGENSWDLQAKSKMDQVCDVVKDALEGLDSEKYLLG
ILTCHIRKAQPELEVCLQKIQEIWDTPPQSRDGVSAEEALNYVLLLVDVNELFNVALGTY
NLRLVLMVAEKSQKDPKEYLPFLKQLQNMEENLQRYTIDLHLKRYHKAIQHLSKCGPDRF
ADLLALVKEHKLYRSALQLYTTDSKEYRDITVEYGEYLLKKGHVEEAGLMFSRCEEWERA
LQAYEQCLMWPFLVVLXQDITVEYGEYLLKKGHVEEAGLMFSRCEEWERALQAYEQCCSW
RQALCVSCRLHYSTQQTAQLALRMADFLRNNGRHCEAAVLLEQYVQDEEGAIITLLEGSQ
WEEALRVIYQHSRTDIIDTNFKPALLEASQRQLAFLQENKALFIRHKDRLAVVRKEKSMA
CTEILGDDHGDQDADLYSDTSSTTRTHSTRGSTKYSGTSKTSGRSSKSRRKAERKKLSLR
EGSPYEDSALLSALKDIIDAVDKSKDDVHQLLKMLVLFGLDSDAGMIQSSLEATLSLIDS
CTSEIWQTGSGSGSAQTQMTLGPHSTVNSIIASMNAGPQPVDTVVAVPPPARLKDSKWKL
SILEGT
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacctggagcttctccagtgtgtccatcaggagtgtatacctgctagtctgggt
gcaccatgctgcatcgctgtggactccgacaccggtactgtgtacgctggtacagacacc
ggcctggtggctctggatggagacagtcactctatgttgtgtagtgtatctctgcgggag
gcaggttacctgtgtgagactgacaacagtcacctggtggggatacagtacatgtacgac
caggactctgtgtgtgtggccacttcctcaggagatgtcatcttatggaacatcccaact
caggagttggagtgtgttggaacagtggacagtggactgacttgtatggcctggagtccc
aatcaggaccttgttcttcttacaacaggtgaagaaaagatggtgatgatgaccagtgat
ttcaaccccatctctgagaccagtattcatcaggaggagtttggggaagctgagttcatc
actgctggctgggggaagaaagaaacccagttccatggatcagaagggaaacaggcagct
tttcaacaaaaagagtccgtcagtccagccttgccatgggatgacaggagaccacgagtc
agctggtgcagggatgcctttgttgtcagttctgtcagtccagtggatggtgccagacgg
ctgcgcgtgtggaacagggactgtgtgctgcaggcgaccagtgagaatgtctccatgtta
gagcaggctctgtcctggaagccttccggcagcctgatagcatctactcaaagaaaacct
caccgacatgaagttgtcttcttcgaaaagaatggactgagacatggagggtttgtcttg
ctttttgggaaggacgaaataaaggtgctggagctcctgtggaactcagactctacagtg
ctggcagtctggctggaggagttgtctccagtgcaggaaaaaggagctggtgatgaggac
aaatctttcacacccagtacatatgttcaactatggacagtcagtaactaccactggtac
ctgaagcagagtctccaatttgggaagagcctgacagacaaacctacagcagtggtctgg
gacgctgaacatccttacaggttacaccttgtgtgccatggaggccgatatgtgatgtat
gaatggacatgggtcatcaacaggagcgatggcaggacgtctgacgacaactcgtacgtt
gctgtcattgatggagacaaggtgctgctgactccatttcgccaggtggtgatcccaccc
ccgatgagtgcctacagcctacagctgcccacacctgttagccaggtgctgttctcacca
tcccctggggtcaacgacctggcagctgtgctcactgatgggactgttgtcttctacaca
cttgatttaaagcagccagaggaagaagtgagtggtgacaccagtgtctgtgtgaatgct
gccggagggacagggttcaaacctgctgtccgcatgcatgttcaacaccgcagactgggg
ctttcttgttgtatatcacaagagaagtggagatgtgcccagaccctccaccactttgtg
tggcttgctgaggaccagctgctgacagtttcctgggacccctcgtcatccacatcagtc
ctgtaccacctggggacacaggaggaacaggcaactctcttacaccaggtggctgtagaa
ggcagggtgtaccagctgtgtcgcagctcggatggacacagtgtagccatagaactgaca
gatggtacagtgttccggtatcacatagacaaagttgcggcctgtccagtgttggagcca
tggagaagccaagatggcgtgccggtcaagttttctgtactgtgttcccagatgggactg
tgcagcatgggtggacatgagactgttcttggtctgagtgacaagttcagattgttcatc
aatggtgacgagatttccagcaattgcacatcgtttgctgtgcacaatgaccacctgctg
ctgaccacccatgcccacacttgtgcatgtcttccacttcacacagccagcaaagatctg
tcctcagccatagatgagaagacacgcagggttgagaggggaagtcgactgatcactgtt
gttccatgggatacaaaggttattctacagatgccacggggtaaccttgaaactgttcac
cccagaactctggtgttgggactagtccagaagatgattgacagtcagcagttcctggaa
gcctttcttgtcatgaggaaacacagagtcaacctcaacttgctgtgtgacctcaaccct
aaggtgttcctgtcctgtgtaccagagatggtgactcagctgaaggacatcaactttatc
aacctgttcctcacagaactcagggaagaagatgtgacaaaaacaatgtactcagagtac
tgctgcagtcctgatggtgagaacagctgggatctacaggccaagtccaagatggatcaa
gtctgtgatgttgttaaggatgctttggagggtctggacagtgaaaagtaccttcttggg
attctaacatgtcacatcagaaaggcacaaccagaactagaggtctgcttacagaagatc
caggaaatctgggacactcctccccaaagccgggatggcgtgagtgcagaggaggccctg
aactatgtcctactcctggtggatgtgaacgagctgttcaacgtggcactgggcacatac
aaccttagacttgtactcatggtggccgagaagtcacaaaaggatccaaaggaatatttg
ccattcctgaagcagctacagaacatggaggagaacctgcagaggtacacgatagatctg
cacctgaagaggtaccacaaggccatccaacacctcagtaaatgtggtcctgacagattt
gcagacttgctggcccttgtaaaagaacacaaactgtacagaagtgctcttcagctttac
accacagacagcaaggagtacagggacatcacagtggagtatggagaataccttctgaag
aagggacatgtggaggaggcaggcctgatgttcagtagatgtgaggagtgggagagggct
ctacaggcctatgagcagtgtttaatgtggcccttccttgttgttctataacaggacatc
acagtggagtatggagaataccttctgaagaagggacatgtggaggaggcaggcctgatg
ttcagtagatgtgaggagtgggagagggctctacaggcctatgagcagtgctgtagttgg
cgccaggccctgtgtgtgtcctgcagactacactacagcacgcagcagactgcccagctg
gctctcaggatggcagattttctgagaaacaatggcagacattgtgaggcagctgttctg
ttggagcagtatgttcaggatgaggagggagcaatcatcaccttgttggaaggtagccaa
tgggaggaggctcttagagtgatataccagcacagccggacagacatcattgataccaac
tttaaacctgcactgttggaagcatctcagagacagcttgctttcctacaggaaaacaaa
gcactgttcatcagacataaggacagacttgctgttgtgaggaaagaaaaatccatggct
tgcacagaaatcttaggtgatgaccatggagaccaggacgctgacctgtactctgatacc
agcagcaccaccaggacacactcaactcgaggctctacaaagtactcaggcacctccaaa
acatcaggacgatcatccaagagtaggaggaaagcagaacggaagaagctcagtctcaga
gaaggcagcccctatgaagatagtgctttgctatcggcactaaaagatataatagatgca
gtagacaaatccaaagatgatgtccatcagttgctgaaaatgttggtactgtttggactt
gactcggatgctgggatgatccagtcatcactggaagcgaccctgagtctgattgacagc
tgtacatcagagatctggcagactggtagtggtagtggctctgcacagacacagatgacc
cttggcccccattcaactgtcaatagcatcatcgcatctatgaatgctggaccacagcca
gtagatacagtagttgctgtccctccaccagctaggctgaaggactccaagtggaaactg
tcaatactcgagggaacatga
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integrated database retrieval system
