Branchiostoma floridae (Florida lancelet): 118411247
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Entry
118411247 CDS
T01074
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118411247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118411247
Spliceosome [BR:
bfo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
118411247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
118411247
NCBI-ProteinID:
XP_035669295
UniProt:
A0A9J7KT58
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All DBs
Position
3:10496580..10513418
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AA seq
677 aa
AA seq
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MMAAPLPKKELDELKPYIDKTVQNVLGISEPTLTMAAINCLARGLDRDRMKDQLRPFLED
STETFVDRLLSAVDEVRSARHGREKDTRNRKRNLREVFADEDTDDVAASKKSKKPPAFDD
DDVIPAASAESPGMLTKQQIQQMMENATKQIEERKKQMKIMGVGSATSGSTNTTSGSVPS
VPSNLLLNAPTATNYMNDAIEKAKRAAELQAKIQAQLANKPGLLGTMKQSSGLPLADKPD
KVQLVEGRIVDASGREVQLVQRTPTLKANIRAKRREEFKLVQDRAAELDESSPFFDDRVA
LKPAVRQRRPFKFHDPGKFEAIAQRVRAKSQLEKLQAEIAQAAKKTGIQSAAKLALITPK
KDDTEEQEVPDVEWWDSCILRAESYDDMDAGVDEKGSKQEQFVGVTHLVEHPIEMRPPSD
PTKARVLPVYLTKKERKKIRRQNRREVQKEMQEKVRLGLEAPPEPKVKISNLMRVLGSEA
VQDPTKVEAHVRAQMAKRQKAHEEANAARKLTTEQRKEKKIKRLKEDTSQGVHVSVYRVR
DMRNPAKKYKVEANANQLYMTGMVVMYQDVNVVVVEGGPKAQKKFRRLMMHRIKWDDDQP
SRDDDDDESDEEESKKRNKCSLVWEGTVKSQNFGQIQFKICPTESLAREHFRKHGVEHYW
NLAHSQSVLEATEDDTL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgcccccctccccaagaaagagctggacgaactgaaaccgtatatcgacaag
acggtacagaatgttttagggatctctgagccgacgttgaccatggccgccatcaactgt
ctggcgcgaggactggacagagataggatgaaagaccagctgcgtccattcctggaggac
agcacagagacgttcgtggaccgactcctgagcgcagtggacgaggtgcggtcagcccga
catggcagagagaaggacacacgcaaccgcaagaggaatctaagggaggtatttgctgac
gaggatacagatgatgtggcagcatccaagaagtcgaagaagcctccagcatttgatgat
gatgatgtaatacctgccgcctcagcagaaagtccgggcatgctcactaaacaacagatc
cagcaaatgatggagaatgccaccaaacagattgaagaaaggaagaagcaaatgaaaatc
atgggtgtgggctcggccacttctggctctaccaacacgacatcgggcagcgtacccagt
gtgccgtcaaacctgcttctcaacgcgcccacagccactaactacatgaacgatgccatc
gagaaagccaagcgtgccgcggagctgcaagccaagatccaggcacagctggccaacaag
cctgggctgctggggaccatgaaacaaagctcaggcctgccactagctgacaaaccagac
aaggtgcagctggtggaggggcgcatcgtggacgcttccggaagggaggtgcagttagtg
cagcggacaccgacactgaaggccaacatccgtgctaagaggcgggaagagtttaagctg
gtacaggacagggcggcagaactggatgaatccagccccttctttgacgacagagtcgcc
ctgaagcctgccgtaagacagagaagaccgttcaagtttcacgacccaggcaaatttgag
gcaatcgcacaaagagtgcgagcaaagtcccagctagaaaagctgcaggctgagatcgcg
caggcggctaagaagacgggaatccagtccgccgccaaactggcgctcatcacgccgaag
aaggacgacacagaagagcaggaggttcccgacgtggagtggtgggattcctgcatcctg
cgggcagagtcgtacgatgacatggatgcaggggtggacgagaaggggagtaaacaggaa
caatttgtaggggtgacccacctagtggaacatcccatcgagatgaggccgcccagcgac
cccaccaaggctcgcgtccttcccgtctacctgaccaagaaggaacggaagaaaatccgc
agacagaacagacgagaggtccagaaggaaatgcaggaaaaggtccgcttgggtctagag
gcaccaccggaaccaaaagttaaaatctccaacctgatgagagtacttggcagcgaggct
gttcaggaccctaccaaggtggaggcccacgtacgagcgcagatggcaaaaaggcagaaa
gcccacgaggaagctaatgcagccagaaaactgaccactgaacaaaggaaagaaaagaaa
atcaagagactaaaagaagacacttcacagggtgttcatgtttctgtttacagagtacga
gacatgagaaatccagccaagaagtacaaggttgaggccaacgctaaccagctgtacatg
acagggatggtagttatgtaccaggatgtcaatgtggtggtggtagaaggaggtcccaag
gcccagaagaagttccgcagactgatgatgcacagaataaagtgggatgatgaccagcca
tccagagatgacgatgatgatgagtcggatgaagaggagtcaaagaagaggaataagtgt
tctttggtgtgggaggggacagtgaagagtcagaacttcggccagatccagtttaagatc
tgtccgacagagagcttggcgcgggaacatttcaggaagcacggcgtggaacactactgg
aacctcgcgcacagccagtccgtgttagaggccacagaagacgataccttgtga
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