Branchiostoma floridae (Florida lancelet): 118411387
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Entry
118411387 CDS
T01074
Name
(RefSeq) protein transport protein Sec24C-like
KO
K14007
protein transport protein SEC24
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118411387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118411387
Membrane trafficking [BR:
bfo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
118411387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
RbcX
Motif
Other DBs
NCBI-GeneID:
118411387
NCBI-ProteinID:
XP_035669541
UniProt:
A0A9J7MJF0
LinkDB
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Position
3:33339558..33383631
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AA seq
1140 aa
AA seq
DB search
MNPQAGYNQPYQGGYQNYGGSPPPAGQNRGYGGPVPGQPPQQNAYMNGPPSLGPPGPKPS
QGGYGAPPSQKGPAGGYAQGGGDMQNGFSHSGQTYGAPPQQQQYGRGPPPPGQQQYQQGP
PGPPMSSVQSGPQGPPMSGIQTGPPMSSVQSGRPGPPPMSSGQTQMVNQMQTMSLSQQRP
GPPGATMGAPPPSSMPPSSYGQPQGPPGSSAPPSSMSMGPPSSMSMGPPQMGPPGPMYSS
AGYAPPSSQQGIVGMQKSTESKPKPNYTGAPGGYQGQYGPPPSSPGGFGQPPPPGPGGMG
GYQGQPVAQPPQQRRLDPDQIPSPAKLDPDLIPSRIQVIEDDRTSRGGQQFATNTRGLMP
PLVTTDFLTIDQGNCNPAFMRASMYNIPCTADMYKQCNVPMSLVIKPFAELKPQEAQLCV
VDHGAAGPVRCNRCKAYMCPFMQFVEGGRRFMCSFCSCVTDVPDTYFAHLDHTGRRIDVY
QRPELACGSYEFVATLDYCKQRAVPAQSAPQAAEGAAESDVNNQPPSPPAFIFMIEASYN
SVKNGMLPLLAKHLKGLLDTLPREAGQEESSIRVGFVTFNKVLHFYNVKGTLAQPQMLVV
SDVADVFLPLLDGFLVTVQEARAVIDSLLEQIPQMFSDTRETEICLGPVVQAGLEALKAA
DCAGKLFVFQTSLPLAEAPGKLKNRDDRKLLGTDKEKTLFQPQTSFYQTLGKECVAQGCC
VDIFLFPNQYVDVATVSEVCKLTGGQLYKYNFFTLEQTTQHHNPMEAVNDGERFIQDLTQ
DIQRPIVFDAIMRVRTSTGFRPVDFLGNFYMSNTTDVELAAMDCDKAVAVDFKHDDKLSE
ELGAYIQCAVLYTSVSGQRRLRVHNLSLNCCSTMADLYKSCEMDAIMNILSKQAVRSVVN
STPKAIREQLMAQCANILATYRKNCASPSSAGQLILPECMKLLPLYVNCVLKSDALQGGA
ETSTDDRAWLMHLLNSMDINSSGAFFYPRLLPLHNLSPDKDDVPTAIRCSIERLKDNGVY
LLENGVSMFMWIGMNVDPEWIQSVFGVQSVAQIDIDSPTLLDKEGTLLSLDNPLSARVRN
LVQQIRSQRSRFMKLTIVRQRDKLEPWFQHFLVEDKGLYGGASYVDFLCHMHKEIRNLLS
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgaatccacaggcaggctacaaccaaccctaccagggggggtaccagaactacgggggg
tcgccccctccagccggacagaacagggggtacgggggccccgtaccgggacaaccccct
cagcagaatgcctacatgaatggacccccttctctgggcccccctgggcccaagccttcg
caagggggttatggagcacccccctcccagaagggaccggcaggggggtatgcacagggg
ggtggtgacatgcagaatgggttttcacacagcggacagacatacggagcaccgccacaa
cagcaacagtacggcagaggccctcccccacctggccagcagcagtaccagcagggacca
ccagggcctcccatgtccagtgtccagtctggcccgcaggggcctcccatgtcagggata
cagactggcccgccaatgtccagtgtccagtccggccgaccggggccaccacccatgtcc
agtggtcaaacacagatggtgaaccagatgcagaccatgagtctgtcccagcagagacca
ggtcctcctggtgcaaccatgggtgccccccctcccagcagcatgcccccttcatcctac
ggacaaccacaaggtccccccggaagctctgcacccccctctagtatgtccatgggaccc
ccctccagcatgtccatgggacccccccagatgggcccccctggaccgatgtacagctca
gctgggtacgccccacccagctcccagcaaggcattgtgggaatgcagaaatcaacagaa
tccaaacctaaacctaactacacaggagccccaggggggtaccagggacagtacggcccc
cctccctccagcccggggggcttcggacagcccccaccccccggtcccggtggtatgggc
ggttaccagggacaaccggtggcacagcctccccagcagcgtcgtctggacccagaccag
atccccagtccggccaagctggacccagacttaatccctagccgtatccaggtgatcgag
gatgaccggaccagccgcgggggtcagcagttcgctaccaacaccagaggactcatgcct
cccctggtcactacagacttcctaaccatcgaccaagggaactgcaacccggcgttcatg
cgagcgagcatgtataacatcccctgtacagcagacatgtataaacagtgtaacgtcccc
atgtcactcgtcatcaagcccttcgcagagctcaagccacaggaggcacagctctgtgta
gttgaccacggtgcggccggccctgtgaggtgtaaccggtgtaaggcctacatgtgcccc
tttatgcagtttgtggaaggcggtcgcaggttcatgtgcagtttctgtagctgtgtcaca
gatgtgcccgacacgtatttcgcccacctggaccacacggggcggaggatagacgtgtac
cagaggccggagctcgcctgtgggtcgtacgagttcgtcgccacgctagattactgcaaa
cagcgggccgtgcctgcgcagtccgcacctcaggcagcagagggcgctgcagagagtgac
gtcaataaccagcccccgagcccgcctgcgtttatcttcatgatcgaagcgtcgtacaac
agcgtgaagaacgggatgttgccgctactcgccaaacacctgaaggggctgctcgacacc
ttaccgagggaagctggtcaggaggaatcttccatcagagtgggttttgtgaccttcaac
aaagtgctgcacttctacaatgtcaagggcaccctggcgcagccccagatgttggtagtt
tccgatgtcgccgacgttttcctgccgctgttggacggattcctggtcacggtacaggag
gcaagggcagtcatagatagtttgttggaacagattccgcagatgttctcggacacgagg
gagacggagatctgcctgggaccggtggtgcaggcggggctcgaggcgctcaaggctgcg
gactgtgcggggaagctgtttgtgttccagacgtcgctgccgctggcagaggctcctggg
aaactgaagaaccgggacgacaggaaactgctggggacagacaaggagaagaccctgttc
cagccccagaccagtttttaccagaccctggggaaggagtgcgtggctcaaggctgctgt
gtagacatcttcctcttccctaaccagtacgtggacgtggccaccgtgtcggaggtctgc
aagctcaccggcgggcagctctacaagtacaacttcttcacgctggaacaaaccactcaa
caccataaccccatggaggcggtgaatgatggggagcggtttatccaggacctgacgcag
gacatccagcgaccaatcgtgtttgacgccatcatgagagtccggactagcacagggttc
cgaccagtggactttctggggaatttctacatgtccaacacgacagacgtggagctggca
gccatggactgtgacaaggccgtcgctgtcgacttcaaacatgacgacaagctgagcgaa
gagctgggagcatacattcagtgtgcagttctgtacaccagtgtgagtggacagaggcgg
ctgagagtgcacaacctgtcgctgaactgctgcagcaccatggctgacctctacaagagc
tgtgagatggacgccatcatgaacatcctctccaaacaagcggtgcgatccgtggtgaac
tccacgcccaaagccatccgtgagcagctgatggcccagtgtgccaacatcctggctacc
tacaggaaaaactgtgcaagcccctcatcagcaggacagttgatccttcccgagtgcatg
aagctcctcccactctacgttaactgtgtgctgaagagcgacgcgctgcagggcggggcc
gagacgtcgacagacgaccgcgcctggctcatgcacctgctcaactccatggacatcaac
tcttcaggggccttcttctacccaaggttactccccctgcacaacctgagtccagacaag
gacgacgttcccacggcgatcaggtgttccatcgagcgtctgaaggacaacggtgtgtac
ctgctggagaacggagtctccatgttcatgtggatcggcatgaacgtcgacccggagtgg
atacagagcgtcttcggcgtgcagtccgtcgcgcagatagacatcgactcccccacctta
ctggacaaagaaggcaccctgctcagcctggacaacccgctgtcggcccgcgtgcgcaac
ctggtgcagcaaatacgcagccagaggagcaggtttatgaagctaacgatcgtgagacag
cgggacaagttggagccgtggttccagcacttcctggtggaggacaagggtctgtatggg
ggggcatcgtacgtggacttcctctgccacatgcacaaggagatcagaaacctcctgagc
tga
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