Branchiostoma floridae (Florida lancelet): 118411481
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Entry
118411481 CDS
T01074
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118411481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118411481
Spliceosome [BR:
bfo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
118411481
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
118411481
NCBI-ProteinID:
XP_035669662
UniProt:
A0A9J7MJE9
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Position
3
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AA seq
505 aa
AA seq
DB search
MAAAVKRKYSDSSEDEENEPTRRVRGGSDARSRHCPYLDTINRSLLDFDFEKLCSVSLSH
LNVYACLVCGKYFQGRGRKSHAYTHSVQVDHHVFLNLHTLKFYCLPDNYEVIDSSLDDIK
YVLNPTFKTDHIQQLDGSSKLSRAYDSTMYLPGIVGLNNIKANDYCNVVLQALSHVSPLR
DYFLQEENYKDIKRPPGDIMFLIVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKR
FQITEQGDPIDFLSWFLNAMHASMGGNKKVMSSSVGKVFRGTMKIYSRQLITKDDTGETN
ISEGKEKEAEKGPETVTTSPFMYLTLDLPPPPLFQDEYEQNIIPQVPLANLLAKFNGEAE
KEYKSYKDSTLKRFELTRLPPYLILYVKRFTKNNFYVEKNPTIVTFPVKNIDLREYLSKD
PEIQKKHPNTTYDLIANIVHDGLPGAGKGTYRVHIYHKGSGQWYEMQDLHVADILPQMIT
LSESYIQIWELRKDQPSDTDITVDS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgtgaaaagaaaatattctgactcttcagaagacgaggaaaacgagcct
acacgtagggtccgtggagggagtgatgcaagaagtcggcactgcccctatctggacacc
atcaacaggagtctacttgactttgactttgagaagctgtgttctgtctccctgtcccac
ctgaatgtttacgcctgcctggtctgtggcaaatacttccaaggacgaggccggaagtct
catgcctacacccacagtgttcaggtagaccatcatgtcttcctgaaccttcacacgctc
aagttctactgcctacctgacaattacgaggtcattgactcctccctggatgacatcaag
tatgtgctgaatccaacgttcaagacggaccacatccagcagctggacggttcctccaag
ctgtcccgtgcgtacgacagcaccatgtacctgccggggatcgtggggctcaacaacatc
aaggccaacgactactgtaacgtggtcctgcaggccctgtcacacgtcagccccctcagg
gactacttcctgcaggaggagaactacaaggacatcaagcgcccacccggggacatcatg
ttccttattgtacagaggtttggtgagctgatgaggaagctgtggaaccctcggaacttt
aaggcgcacgtcagcccccacgagatgctgcaggccgtggtgctctgcagcaagaagagg
ttccagatcacagagcaaggtgacccgatagacttcctgtcttggttcctgaacgccatg
catgcctccatgggtggcaacaagaaagtcatgtcaagttcagtcggcaaggtgttccgt
ggaacaatgaagatttattccagacaactcatcactaaagatgacactggagagaccaac
atttctgaggggaaagaaaaagaagctgaaaaagggccagaaaccgtgacgacctcgccc
ttcatgtacctgacccttgacctcccccctccaccgctgttccaggatgagtacgaacag
aacatcattccgcaggtgccgctcgccaacctgctggccaagttcaacggagaagccgag
aaggaatacaagtcttacaaagactccaccttgaagaggtttgagctgaccaggctgcct
ccctatctcatcctctatgtgaagcgtttcaccaagaacaacttctatgtggagaaaaat
ccaaccattgtcaccttccctgtcaagaacattgatctgagagaatacctgtccaaggac
ccagagatccagaagaagcatcccaacacgacctatgacctgatcgccaacatcgttcac
gatgggctgcctggggccggcaaggggacgtacagagttcacatctaccacaagggttcc
ggccagtggtatgagatgcaggacctccatgtagccgacatcctgcctcagatgatcacc
ctgtcagagtcttacattcagatatgggagctgaggaaagaccagccatcagacacagac
atcactgtagactcctga
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