Branchiostoma floridae (Florida lancelet): 118411507
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Entry
118411507 CDS
T01074
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118411507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118411507
Enzymes [BR:
bfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
118411507
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
118411507
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
118411507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
Cdd1
HHH_2
NTP_transf_2
NAD_binding_5
Motif
Other DBs
NCBI-GeneID:
118411507
NCBI-ProteinID:
XP_035669707
UniProt:
A0A9J7MJF8
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All DBs
Position
3:19342907..19360798
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AA seq
364 aa
AA seq
DB search
MFGRFLVYSRRFGRFFHTSRTLQCSDDMSKRKGIAENVNSDFCDFLTELANYEKNVNRQM
HKYNAYRKAASVLAKHPTRIKNGTEARKLDGIGEKIAKKIDEFVQTGTLQKLVKIRASDT
NQAINLLTRVTGIGPAAARKLVDEGITTIEDLRKNPGKLNHHQQLGLKYFEDFEKRIPRE
EMLEMQSLIQGEINQLDSDYVATICGSFRRGAASSGDIDILLTHSTYSSEDKKKPELLKQ
VVHHLEKSKFVVDTISLGDTKFMGVCRLPAGKGSKERTFRRIDIRLLPNDQYYCGVLYFT
GSDVFNKKMRAHALEQGFTLNEYTIRPLGSTGVPGEALPVSSEEDVFDIIGMKYLKPSQR
SEGQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacggttcttggtatattccagacggtttggaagatttttccacacgtccagg
acacttcagtgctcagacgacatgagtaaaaggaagggaatagcagagaatgttaattca
gacttctgtgactttctgactgaactggccaactatgagaagaatgtcaaccggcaaatg
cacaagtacaatgcttacaggaaagctgctagtgtgctggcaaagcatcccaccagaata
aagaatggcacagaggctagaaagctggatggcattggagagaagatagccaagaaaatt
gatgagtttgtccaaacaggaacactgcaaaagctagtcaagatccgagcgagtgataca
aaccaggctatcaacctcctgacaagagtcactggtattggaccagcagctgccaggaag
cttgttgatgaaggcataacaacaattgaagatctgaggaagaacccaggcaagctaaac
caccatcagcaacttgggctgaagtacttcgaagactttgagaagagaattccaagagag
gaaatgcttgagatgcagtctctgattcaaggggagattaaccaactggacagtgactat
gttgctacaatctgtggcagctttagaagaggagcagcatcaagtggtgacattgatatc
ctactgacccactccacttactcaagtgaggacaagaaaaagcccgaactcctgaagcag
gttgtccaccatctggagaaaagcaagtttgttgtggacaccatctcacttggggacact
aagttcatgggtgtgtgcagactgcctgctgggaaaggtagtaaggagagaactttcagg
agaattgacatcagattgctgcctaatgaccagtattactgtggagtgttgtacttcact
ggcagcgatgtcttcaacaagaagatgagagcccatgccctggagcagggattcactctg
aacgagtacaccatccgtccacttgggagcacaggtgtgccaggcgaagccttacctgtg
agctcagaagaagacgtctttgacatcatcggcatgaagtacctgaagccttcacagagg
agtgaaggccaataa
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