Branchiostoma floridae (Florida lancelet): 118411539
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Entry
118411539 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase Trim36-like isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118411539
04121 Ubiquitin system [BR:
bfo04121
]
118411539
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118411539
Membrane trafficking [BR:
bfo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
118411539
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118411539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
fn3
zf-RING_UBOX
ANCHR-like_BBOX
SPRY
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-C3HC4_2
RING_XB3-XBAT31
COS
Pur_ac_phosph_N
14-3-3
Ig_DSCAM-DSCAML_C
ALMT
Motif
Other DBs
NCBI-GeneID:
118411539
NCBI-ProteinID:
XP_035669756
UniProt:
A0A9J7MK00
LinkDB
All DBs
Position
3:complement(9892846..9911069)
Genome browser
AA seq
849 aa
AA seq
DB search
MHEFQSTDDESEITHDDLAEFVRLFPAISLCTCHNHGNRQDVVCEDLTTDSVFGASPEPP
LSSEEKVRRTLSRRSSRSGIEPVTPGTPSSHQHTRIPMPTFKSPPERSNSDESDRDIPSP
TSSSESSCSRSRKASSSGDLSSFANMERELQCPACSELFTQPLVLPCQHNICHRCAKAIL
YRDSPDTPAVGPLYSAVQSPMQSPRSARQRKASTPGPLQRVPSFRRRSSASRISTPTGPK
SPPPLKEFPCPKCQEGVELGPKGINGLYRNFILETIVERYKFQARKAGAIPCQSCKSRPP
ADATKTCLDCQASFCNECFKTVHIWGTPKAQHEYVGPTSSFRPRALLCVEHETEKVSMYC
VACKRPVCHLCKLGGSHANHKFHQMNTAYKNIEEKLRSSLRILKDKQQKVEEQKRVVMEK
RENSKKAAILVKDNIAKAIDSLHSILDDRKSVLLEKAEKVMFAQESDLDAALAQSREMMG
ISGLIEYVEQVLKENNHACFLQTATGLCKRVKEATEMPLPVDLDATGESLTLDITREEEM
LSQLDFLQAPNKVVLHTNAMVAQDGRVDVTWNPLPPTSSPADSIHVQCWKMAAVGGDAEL
HDGTSEAPTHAQTIRCVDVITCRCELSELESGAWYAFRVRACNTAGPGPWSDIGTIRTSP
DLHFDLEDNYDHDALRIDIKGRAITSVLLPAKLRPDNSVNHVVTMETHYVTGDVKITSGH
HYWEVNVGRDSFLAVLGVADEGAIQTELRRQSDADSGHDSCDENDLLGVTSTMATVTVTM
GTLEGVDKSVKCRHGDDCGSRVGIFVDADEGVVRFYDVMTRKMVKECSVNAGKVLVPLIG
LCGPGIVHY
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagtttcaatccacggacgacgagtcagaaataacgcacgacgatttggcggaa
ttcgtccgactttttcccgccatttcgctctgcacctgtcataaccatggcaaccgtcaa
gatgtcgtctgcgaggacctgaccacagactctgtttttggcgcgagtccagagccgccc
ctttcttctgaagagaaggtgcgcaggacactttcaagaaggtcctcgcggagtgggatc
gaacccgtgactcctggtaccccttccagtcatcagcacactcggatcccgatgccaacg
ttcaagtcaccgcctgagagatcgaactcggatgagagtgacagagacatcccctcgcct
accagctcatcggagagctcatgttcaagatcaagaaaggccagctcttccggtgatctt
tcaagcttcgccaacatggagcgcgaactccagtgcccggcatgttcggagctgttcacc
cagcccctggtccttccgtgtcagcacaacatctgccaccgatgcgccaaggccattctt
taccgagacagtccggacacgcccgcggtaggaccgctgtacagcgccgtgcaaagcccc
atgcagagcccgcggtccgcccgacagaggaaggcatccacacccgggcctttacaaagg
gtaccatctttccgccggaggagtagtgcctccagaatatccaccccgaccggtcccaag
tctccccctcccctgaaggagttcccctgccccaagtgtcaggaaggggtggagctcggc
cccaagggaatcaatggcttatacaggaacttcattcttgagacgatcgtggaaagatac
aagttccaagccaggaaagccggcgccatcccctgtcaatcatgtaagtcacgccccccg
gcggacgccaccaaaacctgtctggactgtcaggccagcttctgtaacgagtgtttcaag
actgttcacatctggggcacccctaaagctcagcacgagtacgtgggtcctacctccagc
ttccgcccgagggcgctgctgtgcgtcgaacacgaaacggaaaaggtgagcatgtactgc
gtggcgtgtaagagaccagtgtgccacctgtgcaaactgggaggatcgcatgcaaaccac
aagtttcaccaaatgaacaccgcatacaaaaacatcgaagagaaactgcgatcgagtttg
cggattttgaaagacaagcagcaaaaggtagaagaacaaaaacgtgtggtgatggagaag
agggagaacagcaagaaagcagccattctggtgaaagacaacatcgcgaaagccatcgac
tctcttcattctattttggacgaccggaagtcagttttgctagagaaagcggaaaaggtg
atgtttgcacaggaaagcgacctcgacgccgctctcgcccagtctcgcgagatgatgggg
atctcggggctgatcgagtacgtggagcaggtcctgaaggagaacaatcacgcctgcttc
ctccagacagccacgggactctgcaaaagggttaaagaagccacggagatgccccttcca
gtagacttagacgcgacaggcgagtcgctgactcttgacatcacgagggaggaggagatg
ctctctcaactagactttctgcaagctccaaacaaggttgttctgcataccaacgccatg
gtagctcaggatggacgagttgacgtcacatggaaccccctaccccctacgtcatcaccc
gccgactccatccacgtgcagtgctggaaaatggcggcggtaggtggggatgccgaattg
cacgatgggacatcggaggcgccaacacatgcgcagacgatccggtgtgttgacgtcatt
acctgtcgctgtgagctgtcggagttggagtcgggcgcgtggtatgctttccgcgtgcgc
gcctgcaacacggcgggaccgggtccgtggagcgacatcggaaccatcaggacatcgcct
gatctacattttgaccttgaagataactacgaccatgatgctctgcgtattgacatcaaa
ggacgcgccatcacctccgtcctgctgccggccaagcttcgtcctgacaactccgtcaat
catgtagttaccatggaaacgcattacgtcaccggtgacgtcaagattaccagcggtcac
cattactgggaggttaacgtaggtcgtgacagtttcctggcggttctcggtgtagcagac
gagggggcgatccaaaccgaactccgccgacaaagcgacgctgacagcggccatgacagc
tgcgacgaaaacgacctcctcggcgtcacaagcaccatggcaaccgtcacggttaccatg
ggaacattggaaggggttgacaagagcgtcaaatgtcgccatggtgacgactgtggatca
cgcgttggcatctttgtggacgccgacgaaggtgtcgtccgtttctacgacgtcatgacg
agaaaaatggtgaaagaatgttccgtgaacgctggaaaagttctcgttcctctgattgga
ctgtgtggaccaggaatagtccattactag
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integrated database retrieval system
