Branchiostoma floridae (Florida lancelet): 118411810
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Entry
118411810 CDS
T01074
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfo03009
]
118411810
03036 Chromosome and associated proteins [BR:
bfo03036
]
118411810
Enzymes [BR:
bfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118411810
Ribosome biogenesis [BR:
bfo03009
]
Eukaryotic type
Pre-60S particles
Helicases
118411810
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
118411810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
118411810
NCBI-ProteinID:
XP_035670189
UniProt:
A0A9J7MK93
LinkDB
All DBs
Position
3:complement(29763805..29777477)
Genome browser
AA seq
713 aa
AA seq
DB search
MPAQVVKKTTKKTVHMEVSEESVCEEKMDGTPEKVKKDKKSKKRKLETEAAKSVKSVEEP
EKKKKKKTKAEGDAPKKQKKNKEKKTKEENGHVQNGASGSDGECANENGVAENGVAENGT
ITKEEGDFENFRITAQTVTKLKARNVVKLFPVQYSTFDFVYDGWDVITQARTGTGKTLAF
SIPLVERLQKDGVSIKRGRAPVVIVLAPTRELAIQVYEDFKSISTKLTSFCVYGGTPYPP
QNDAINRGLDILVGTPGRIQDHVRSGRLNLSELRHVVLDEVDRMLEMGMVEQVDEILEAA
YKKDDKSQNPQTLFFSATLPNWVHEAARKYMKAEPKHVDMIGTEQNRSATTVEHLAIRCG
WQARAPVIADIITMYSGQHGRAMVFCETKKEANQLVLEGVLKQEAQVLHGDIPQAQRELT
LKSFRDGNIQVLVATDVAARGLDIPEVDLVVQCEPPSDVDSYIHRSGRTGRAGRTGVCVC
FYKPNREQDLRFVERRAGIKFRQINAPQPDDIVKAAANDSARAIEEVPDKMLTHFQEAAE
KLIAEKGAVNAVAAALAVMSGSSEIKKRSLLNADEGFTTMLFHTDRPVRGKGYFWTAIKR
RFGEDIDQNVRGMTMFTNNKGVAFDVPSSMEDQFVDTFQGSYDSRLEVATELPDLEQRMD
SRRGGRGFGRGGGDRRGFSRGRGGGGGRFSGGGRGRAGGFGASRGGSSRHTKW
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccggcacaggtggtcaaaaagacgaccaagaaaacggtgcacatggaggtgtccgaa
gaatcggtttgtgaggagaaaatggacggaactccagagaaagtgaagaaggacaagaag
agtaagaaaaggaagttggagacagaggctgccaagtctgtgaaaagtgtcgaagaacca
gagaagaagaagaaaaagaagaccaaagcagagggcgacgcccccaagaaacaaaagaag
aacaaagaaaagaaaacaaaagaagaaaatggccatgtacagaatggtgcttctgggtca
gatggggagtgtgcaaatgagaatggggtggctgaaaacggggtggccgaaaatgggacc
ataaccaaagaggagggagacttcgaaaacttccgcatcacagcacagacagttaccaaa
ctgaaagcccgcaacgtagtgaaattgttcccagttcagtacagtacctttgactttgtg
tacgatggctgggatgtcatcactcaggcaagaacgggcacaggaaagacgctggcgttc
agcatccctcttgtggagcggctgcagaaagatggggtgtccatcaagcgcggccgggcg
ccggtggtcatcgtgctcgctcccaccagggaactcgccatccaggtttatgaagacttt
aagagcatcagcaccaaactgacctcattttgtgtgtacggagggactccctaccccccg
cagaatgatgccatcaacagaggcctggacatcctggtgggcacgcccggacggatccag
gaccacgttcggagcgggcggctgaacctgtccgagctacgccatgtcgtgttggacgag
gtcgaccgcatgctggagatggggatggtggaacaggtggacgaaatcctggaggccgcc
tataaaaaagacgacaagtctcagaacccgcagacgctatttttctcggccacgctgccg
aactgggttcacgaggccgccaggaaatacatgaaggcggagcccaaacatgtggacatg
atcggcactgagcagaacaggagcgccaccacagtcgagcaccttgctatccgatgtggc
tggcaggcgcgcgccccggttatagcggacatcatcaccatgtacagcgggcagcacggc
agggccatggtcttctgcgagaccaagaaggaggccaaccaattggtcctagagggggta
ctgaaacaggaggctcaggtgcttcatggagacatcccccaggcacagagggagctgact
ctaaagagcttccgtgacggtaacatccaggttctggttgcaactgacgtggcggcacga
gggctggacatccccgaggtggatctggtggtacagtgtgaaccgccctcggacgtagac
tcgtacatccaccggtcggggcgtacgggccgcgccggtcggaccggcgtctgcgtctgt
ttctacaagcccaaccgggagcaggacctgcggtttgtggagaggagagcggggatcaag
ttccgccagatcaacgctccgcagcccgacgacatcgtgaaggcagcagccaatgactcg
gcaagggccatcgaggaagtcccagacaagatgctgacacatttccaggaggccgcggag
aagctgatagcggagaagggcgcggtcaacgcggttgccgcggcgctggccgtcatgtcg
gggtcctcagagatcaagaaacgatcgctgctgaatgcagatgagggtttcaccacgatg
ctgttccacacggatcgcccggttcgcgggaagggctacttctggacggcgataaagcgg
aggttcggagaagatatcgaccagaacgtcagggggatgaccatgtttaccaacaacaag
ggagttgcttttgacgtgccatcatccatggaagaccagtttgtggacacattccaaggt
tcctacgattcccgtctggaagtggctacagagctgcccgacctggagcagaggatggac
agcaggagaggggggagggggttcggcagggggggaggagacagaagaggcttcagcagg
gggagaggtggagggggtggtaggttcagtggagggggtaggggcagagcggggggattt
ggagcaagcagaggtggcagcagcagacacacaaagtggtga
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