KEGG   Branchiostoma floridae (Florida lancelet): 118411835
Entry
118411835         CDS       T01074                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Pathway
bfo03020  RNA polymerase
bfo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    118411835
  09124 Replication and repair
   03420 Nucleotide excision repair
    118411835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfo03021]
    118411835
   03400 DNA repair and recombination proteins [BR:bfo03400]
    118411835
Transcription machinery [BR:bfo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     118411835
  RNA polymerase III system
   RNA polymerase III
     118411835
  RNA polymerase I system
   RNA polymerase I
     118411835
DNA repair and recombination proteins [BR:bfo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      118411835
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1
Other DBs
NCBI-GeneID: 118411835
NCBI-ProteinID: XP_035670220
UniProt: C3ZQF0
LinkDB
Position
1:complement(26487751..26490373)
AA seq 210 aa
MDDEQETYKLWRIRKTIMQLCHDRGYLVTQDELDQRLDQFKDQFGDKPSEGKPARKDLVV
LVAHNDDPTDQMFVFFADEPKIGIKTIKMYCQRMQEENISRAIIVVQMGMTPSAKQALVD
MAPKYILEQFLESELLINITEHQLVPEHVVMTPEEKAELLARYRLKEHQLPRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYISYRLCL
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgaacaagaaacctacaagttgtggaggattcgcaagactatcatgcaactg
tgccacgatcgcgggtacctcgtgacgcaagacgagttggatcagagactggatcagttc
aaggatcagttcggagacaagcccagtgaggggaagcccgcccggaaggatctggtggtg
ctggtggcgcacaacgacgacccgaccgaccagatgttcgtgttcttcgccgacgagccg
aagatcgggatcaagacgatcaagatgtactgccagcgtatgcaggaggagaacatctcc
cgcgccatcatcgtggtgcagatgggcatgacgccttcggctaaacaggctctcgttgac
atggccccaaagtacatcctggaacagttcctggagtcggaacttctcatcaacatcaca
gaacaccagctggtcccagaacatgtcgtcatgactcccgaggagaaggccgaactcctg
gcgcggtacagactgaaggaacaccagctgcctcggatccaggcgggggatcccgtggcg
cggtacttcggactgaaacgcgggcaggtggtgaagattatacgtcccagcgagaccgcg
gggagatatatctcctatagactgtgtttgtaa

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