Branchiostoma floridae (Florida lancelet): 118412290
Help
Entry
118412290 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180-like
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118412290
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118412290
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118412290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
118412290
NCBI-ProteinID:
XP_035670958
UniProt:
A0A9J7KWB8
LinkDB
All DBs
Position
3:complement(13170079..13174400)
Genome browser
AA seq
521 aa
AA seq
DB search
MLEDGCVLKCRRCRSSLVNGRCVVGSHGGGDSCPMEGLSTLWYISDNNIPDWIQDQIIQV
HWTKGRLLCPKCGGRLGSFDFVSLVKCPCGDQVFPPIHIQRCRVDVDKVSPKHIPKTQQG
EKLPLKMCETKEQACGIVSPEHLAGGQLADKHYEKPKKNRKTDVATVGTGDAPVGTGVSV
RTGVLPARTVVTPAKTRLSVAPARKVVTPGGTSVVPAGTGDAPARSNTAPADTGASYVAD
DGVAETDSSVSDMAESTSSTIDEEESEGDQTTRTAASWQRPLVVTDGDDSCIHDTNLFQV
LEGLDGGNTGHTADRRRIKRQTKRERNKLKNIRKKQRRHEKWVKKQTQEVEQFEEAEREG
LICPVCLDLYYEPYMCQPCGHVFCDPCLRQVAKDDPGCTACPLCRTVVITVNYSYQLSKT
MQEFFPRHHESRRRAERQTQYKSWPLPGVTGARALWWTTVTSLTSRRGGRNYPHYRSNDD
DLNYDGSMFDELLVYFYSINWIIGLFVVCGLCYFTIRSFIF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggatggctgtgtgttgaagtgccggcgctgtcgttcatccctggtgaacgga
cgctgcgttgtcggcagtcatggcggcggtgactcctgtcccatggaaggtctgtccaca
ctatggtacatcagtgataacaacatccctgactggatacaggaccaaatcatccaggta
cactggaccaaaggacggctcctgtgcccaaagtgtggcggccggctgggctcatttgac
tttgtctccctggtgaagtgtccctgcggtgatcaggtcttccctcctatacacatccaa
aggtgtcgtgtggacgtggacaaagtctcgccaaaacacatacccaaaacacagcaaggg
gaaaagttacctttaaaaatgtgtgaaacaaaggaacaggcctgtggtattgtttcacca
gaacatttggcaggtggacagctggcagacaagcactatgagaagccaaagaaaaaccgg
aaaacagatgttgcaactgtgggaacaggcgatgcacctgttggaacaggtgtatctgtt
agaacaggtgttttacctgctagaacagttgttacacctgctaagacaagacttagtgtt
gcacctgccagaaaagttgtcacacctggcggaacaagtgttgtacctgctggaacaggt
gatgcacctgccagatcaaacactgcacctgctgacacaggtgcctcatatgtagctgat
gatggagttgctgaaacggattcctctgtcagtgacatggcagagtcaacttccagcact
atagatgaggaggaatcagaaggagaccaaaccacaaggactgctgccagctggcagcgc
cctctagtggttacagatggtgatgacagttgtatccatgacacaaacttgttccaagtg
ttagagggcttggacggagggaacacaggacacacagcagacagacggaggatcaagagg
caaacaaagagggagagaaacaagctgaagaacattcgtaagaagcagagaagacacgag
aagtgggtgaagaaacagacccaggaagttgagcagtttgaggaggctgagagagaagga
ctgatctgtcccgtctgtctggacctgtactatgaaccgtacatgtgtcagccatgcgga
catgtcttctgtgacccttgtctcagacaggtcgctaaggatgaccctggctgtacggcc
tgtccactgtgccgtactgtggtcatcacggtcaactactcttaccaacttagtaagacc
atgcaggagtttttcccacgacatcacgagtcgcggcgccgtgcagaacgccagacccag
tacaagagctggccactcccaggggtcaccggtgcccgtgccctgtggtggacgaccgtg
acctcgctgacctctcgccggggtgggcggaactaccctcactaccgcagcaacgacgat
gatctgaactacgacgggagcatgtttgacgaactcttagtgtacttctactctatcaac
tggatcataggtttgtttgtggtttgtggactgtgttattttaccatacgttctttcatt
ttctaa
DBGET
integrated database retrieval system
