Branchiostoma floridae (Florida lancelet): 118412292
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Entry
118412292 CDS
T01074
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118412292
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bfo03310
]
118412292
Transcription factors [BR:
bfo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118412292
Nuclear receptors [BR:
bfo03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118412292
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118412292
NCBI-ProteinID:
XP_035670966
UniProt:
A0A9J7MKI3
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Position
3:complement(13113730..13139371)
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AA seq
496 aa
AA seq
DB search
MECIVSSWSEDVFGDMEAFPILQGRAAALRQTDQEIFRLQPPKSPFPLPEQSSDSEGANL
IVIPPKMSSKAQIETIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRNKNC
QIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDTLYMEILRQQKEQGKTNEAEA
TYIPSPPATTKPAFPYEPQYPLPDTSAEIPPKMIKPPNNGLSNGLAYAMITEGEILQITF
EITEAYQKTTKYTISDIQSLWSEYHTEITAQKYRSMPRVDFWKFCAEQITGCIQMVVEFA
KNIPGFMDLCQNDQIILLKTGCFENLLVRMSREINPNTNAVLFDGKFASIDFFSILGLND
LVSAMYDLGRSVCMLKLTEQELALFCAVVLVSADRPGLREPMAVEKLQEKIIQALRYQVS
QTHPAEPSFLAKILMKMPNLRSVAARHMEELAALKMQSPSLPEFPPLYKELFMPPEPVQN
TLGGEHALHPHHHMLA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtatcgtctcttcttggtccgaagacgtattcggcgacatggaggccttccct
atactacaaggacgagctgcggccttgagacagactgatcaagaaattttccgcctgcag
ccgcccaagtccccctttccactgccggaacaaagttccgactctgaaggagcaaatttg
attgttattccgccgaaaatgtcaagtaaagcacaaattgagacgatcccatgtaaaatc
tgtggggacaagtcttcaggcatccactatggagttattacctgtgagggttgcaagggc
ttcttcagacgaagtcaacagaacaacgctgcctactcttgtccccggaacaagaattgc
cagattgaccggacgaacagaaaccgctgccagcattgcagactgcagaaatgccttgcc
ctgggcatgtccagagatgcggttaagtttggccgaatgtccaagaagcaaagagacaca
ttgtacatggagatcttacggcaacagaaagaacaaggcaagacaaacgaggccgaggct
acatatatcccctctcctccggcaacaacaaaaccagcattcccctatgaacctcagtac
cccttgcctgacacttcggccgaaatcccgcccaagatgataaagccaccaaacaacggg
ctgtccaacggactcgcttatgccatgatcacagagggagaaatattgcagatcacattt
gagatcacagaagcctaccagaaaactacaaagtacaccatcagtgacatccagtccctc
tggtcggagtaccacacagagatcactgcccagaagtaccgcagcatgcctcgagtggat
ttctggaagttctgtgctgagcagatcacagggtgcattcagatggttgtggagtttgcc
aagaatatccccggcttcatggacttgtgtcaaaatgatcagatcatcctcctgaagaca
ggctgttttgagaacttgttagtgcgcatgagcagagaaatcaaccccaacaccaacgca
gttctgtttgatgggaaatttgcaagtattgatttcttctccatacttggtttgaatgac
ttggtgtcggccatgtatgacctgggtaggagtgtgtgcatgctgaagctgactgagcag
gagctggccctcttctgtgcagtagtcctagtctcagcagaccgaccgggcctgcgcgag
ccgatggctgtggagaagcttcaggagaagatcatccaggccctgaggtaccaggtgtct
cagacccaccccgcggagccctccttcctggccaagatcctcatgaagatgcccaacctg
cgctcggtggcggcgcggcacatggaggaactggcggcgctgaagatgcagagccccagc
ctgcccgagttccctcccctgtacaaggaactgttcatgccccccgagcctgtccagaac
acactcggtggggagcacgcacttcacccgcaccatcacatgcttgcatag
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