Branchiostoma floridae (Florida lancelet): 118412353
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Entry
118412353 CDS
T01074
Name
(RefSeq) PDZ and LIM domain protein 7-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118412353
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
118412353
Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
118412353
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
118412353
NCBI-ProteinID:
XP_035671054
UniProt:
A0A9J7KWV2
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All DBs
Position
3:28879320..28929348
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AA seq
776 aa
AA seq
DB search
MASGQQYQVTLPGPAPWGFRLSGGKDFSSPLSISRVTPGGRASMANIAPGDVVLRIGSRA
AETLTHIEAQNIIKTNDGQLELTLVRGDGRARPMPATPAGPSAPTISAQPVQASAPATQA
PPMRIQRPTVYKPPPLQQPSAPSPPLRAGQPFSPKRVSPVQPGTTVQTGPSHLKVSSVSA
PMTRISPTAPTRLSSLSTTSQPPSTGAPRSPTSPGMVHSQYNTPINMYAVENVTETLKGQ
QLLQEAQNSVDVGAIKRAGEAGLGKPAAPIEIEAGGRKIVHAQYDTPLGMYSTGAVQDTL
EGQLAGLVGGKPEVTAPQRPADQPASKPGTVDTSSAVYQMIQEESARKARMQPRVAPPPE
PPTKPGASHAQSRSFRLLQMMTAEDEAEIDQQEAERERERQEQERLRYQEAVEQEAVASR
QMERLELAEAQAALSQKDRSGPQELQAVTAKEMEKAVACQSCDGDISGPMLKVKDKLFHA
SCFNCAECGTNLRNSVYIMMEGNYYCEKDAIARAKPPPGYDVILLDPAGGKTGAPAAPTA
TTAPSGVGRPADQRRRVVRGDRQDRKAKPIVYAKMGAAGSRTPLCDSCNQIIRGPFVVAI
GRCWMPDCFTCAHCKCNLIEMGFVEEEGQLYCSTHYKEFFAPLCGKCNEPIAETSRKLHG
SNVHVTVKAESIIANDLQFHKHCFLCAKCSCQLDPNGYHLWEGAQICDICFSKTMSTKCI
GCDFPIEPGDRWLEALNCAWHTECFCCAVCQADLEGQPFYAKGKKPFCKNHKKQAI
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggccagcaataccaggtcactctaccgggacccgcgccctggggcttccgt
ctctcgggcgggaaggatttctcctcaccgctgtccatctccagggtaactcctggagga
cgggcttccatggccaacatcgcgcctggggatgtcgtcctgaggatcggctcccgtgcg
gcggaaacactgacacatatcgaggcacagaacataatcaagaccaacgatggacagcta
gaactcactcttgtcagaggggatggcagagcgagaccaatgccagcgaccccagctgga
ccttcagcacccacaatatcagcccagccagtgcaggccagtgctcctgccacacaggcc
ccgcctatgcgcatccagcgtccaacggtctacaaacccccaccactccagcaaccaagt
gccccgtcacccccgctaagggcagggcagccattttccccgaaacgtgtgagccccgta
cagcctggaacaaccgtacagactggtccgtcacacttaaaagtctcctcagtttccgcc
cccatgacacgaatctccccgaccgcccccacacgactgtcgtcgctgtccacgacgagt
cagccgccctccacgggcgctccccgatcgcccaccagtcctgggatggtccacagccag
tacaacacccccatcaacatgtacgccgtggaaaacgtcacggagactctgaaaggtcaa
cagcttctacaggaagcacagaacagtgtggacgtaggtgccatcaagcgtgccggcgag
gccggtctgggcaaacctgccgcgccaatcgaaatcgaggccggcggcaggaagatcgtg
cacgctcagtatgacacgcccctgggtatgtactccacgggcgccgttcaggacacgctg
gagggacagctcgccggattggtcggaggcaagcccgaagtgaccgcgccacagcgccct
gcagatcagcctgctagcaaacctggcacggtggacacgtcgtctgccgtgtaccagatg
atccaggaggagtctgcgaggaaagcccgcatgcagccccgcgtggcgcccccgcccgag
ccgcccaccaagccgggcgcctcccacgcccagtccaggtccttccgcctgctccagatg
atgactgcagaggatgaagcagaaatcgaccaacaggaggcagaacgcgagcgtgagcgc
caggaacaggagcgcctgcgttaccaggaggcagtggaacaggaggcggtggcgtccaga
cagatggagcgtctggaactggcggaggctcaggctgccctgtcccagaaggaccgctcc
ggcccacaggagctccaggccgtcactgccaaggagatggagaaggccgtcgcctgccag
tcctgcgatggagacatctcgggtcccatgctgaaggtgaaagacaagctgttccatgcc
tcctgcttcaactgtgccgagtgtggtaccaacctgagaaactctgtctacatcatgatg
gaaggaaactactactgcgagaaggatgccatcgccagggccaagccgccacccggatac
gatgtgatcctccttgacccagcaggagggaaaactggtgcgccagcagcaccaacggcc
accacggctcccagcggcgtgggacgtcctgccgaccagaggagacgagtcgtccgcgga
gaccgccaggaccgcaaggccaagcccattgtctacgccaagatgggggccgcagggtcc
aggactcccctttgtgacagctgcaaccagatcatcaggggtccgtttgtggttgccatt
ggccggtgctggatgcctgactgtttcacgtgtgctcactgtaagtgtaacctgatcgag
atgggcttcgtggaggaggagggccagctctactgttccacgcactacaaggagttcttt
gcccctctgtgtggcaagtgtaacgagcccattgctgagacgtcccgaaagctccatggt
agcaacgtgcacgttacagtgaaagctgaatccatcattgcaaatgacctgcagttccat
aagcactgcttcctgtgtgccaagtgcagctgccaactggaccccaacggctaccatctg
tgggagggtgcacagatctgtgatatttgcttttccaagaccatgtctaccaagtgcatt
ggttgtgacttccccatcgagcctggcgatcgctggctagaggccctgaactgtgcctgg
cacacggagtgcttctgctgtgctgtctgccaagccgacttggaaggccagcctttctac
gctaagggcaagaagcctttctgcaagaaccacaaaaagcaggccatctaa
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