Branchiostoma floridae (Florida lancelet): 118412402
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Entry
118412402 CDS
T01074
Name
(RefSeq) pituitary homeobox x isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118412402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfo03000
]
118412402
Transcription factors [BR:
bfo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
118412402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
118412402
NCBI-ProteinID:
XP_035671127
UniProt:
A0A9J7KX10
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Position
3:complement(22884508..22977837)
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AA seq
359 aa
AA seq
DB search
MQRFNLVPQLVPAFMYGRWTAHTWPQDWMASSSDVKPHPAALGMAAAAATGLGGTTDGTA
RPITPSASDEDSLGPTSLEGGAESPCVPRTDDITPAATVSAGSPVGKDSGSGSTPSTQDV
TQDDDEMRKRRRQRRQRTHFTSQQLQELEASFARNRYPDMATREEIAAWTNLTEARVRVW
FKNRRAKWRKRERNQLGEFKNGFGPHFNGLMQPFDDGLYSGYSPAYNNWAAKVPSPLTAK
SFPWGLNSSGVPNVNPLSSQAMCFTPPTTIGTATTMVPSMNVGNGLNSLSSLQNPTVAPC
PYASPGQPYAYREQCNSSIAALRLKAKQHSTSVASSFSYPSPVRQQTLSACQYAVDRPV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggtttaatctcgtcccccaactcgtaccagccttcatgtacggccgctggacg
gcgcacacttggccccaggactggatggcgtctagcagtgacgtgaagccgcacccggca
gcgctcgggatggccgcggccgcagcaacagggctcggcgggaccaccgacggcaccgcc
cgcccgatcacccccagcgcttcggacgaagactccctcgggccaacctcgctggaaggc
ggagccgagtccccctgcgtcccccgcaccgacgatatcacgccagcagccactgtgtcg
gcaggctcgcccgtcgggaaggactccggtagcgggtccacgccgtctacgcaggacgtc
acgcaagacgacgacgagatgcggaagcgacggcggcagcgtcggcagaggacgcacttc
acgtcgcagcagctccaggagctggaggcctccttcgcgcggaatcgctaccccgacatg
gcgacacgggaggagatcgccgcctggaccaacctcacagaggccagagttagggtctgg
ttcaagaaccggcgggccaagtggcggaagcgcgagcgaaatcagctgggagaattcaag
aacggcttcggtcctcacttcaacgggttgatgcaaccgttcgacgacggactgtactcc
ggctactcgccggcctacaacaactgggcggcgaaggtgccgagcccgctcaccgccaag
tccttcccgtggggactcaactccagcggcgtgcccaacgtcaacccgctgtcgtctcag
gccatgtgcttcaccccgccgaccaccatcggcaccgccaccaccatggtgccgagcatg
aacgtcggcaacggcttgaattccctgagcagcctgcagaacccgacggtcgcgccgtgc
ccctacgcctcccccgggcagccttacgcttaccgtgagcagtgcaattccagtatcgcg
gccctgcgactgaaggccaagcaacactccacgtcggtcgcgtccagcttctcctacccg
agccccgtccgccaacaaaccctctccgcctgccagtacgccgtcgaccggcccgtctga
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