Branchiostoma floridae (Florida lancelet): 118412551
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Entry
118412551 CDS
T01074
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
118412551
Domain-containing proteins not elsewhere classified [BR:
bfo04990
]
Other domain-containing proteins
Patched domain-containing proteins
118412551
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
118412551
NCBI-ProteinID:
XP_035671365
UniProt:
A0A9J7KX22
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All DBs
Position
3:2097864..2103847
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AA seq
919 aa
AA seq
DB search
MMEYGVTERWMRHAFQKFGRFLARHPHAFLLSSLLIAGILGGGLFFLGNEGSIEKLYTPE
DGLGKVEREYVRTHFPINDSEHFLPSRAVTAGRYGAVIIRPRREVSDNAMEKAVLDAAVS
LHTNISELVTEELGLSYADVCAKWQADCVVSGLDLLEFTATSFPNVTVGYPWTSLPGGLR
TFSGAILGDVTLKDGTETVKKAGAIKLMYHLRSSQEEDDRRSEMWEDAFLDKMAAFSSDV
IAVTWSTSHSLETEIAEMTTRAVPNLAAYTVSMLMAFAVLSCVMRDPVRSKPFLGMVGVL
GAGMAVMATVGLFSYCGVMFNNLVAAMPFLVIGVGVDNMFILLAAWRRTSPRRSVEERAA
DTFTEAGVSITITAMTNALAFAVGAITSFPGVRIFCMYSGVAVLFAYLFQINFFGACLIY
DGIREHQNRHFLTCLPVPLPTQADRSGCCQRFCCTGDAAVGTQKDGEDHNDHLLMQFFKN
YYGPFMTKKWVKVAVFAMFFGYIGVGCWGCTQLREGVPLSKLAGDGSYVARYLDQDDRYF
SRYDVRVSVMVTERLDYWDPDVKDRLEDLLADFEDTEFTYGKNESESWLRVYLKFTGQIP
GLNLTDKTAFMTGLKEVFLKTPGLDRYSYDIHFSEDGSEILASRFFVQTKEIDDTLREKH
MMLKMRGVAKNAPVRTMVYHPAFVYFDQYTAILPNTLQNLGIATVAMLFVSLILMPHPIH
AVWVTLAIASICSGVVGFMTLWGTNLDNISMISLIMCIGFSVDFSAHFIYSFVSAEESSQ
NAKAVHALYSLGVPILQGSISTVLGVAALSNAPSYGFRTFFKTVFLVVVFGLLHGIVFLP
VMLSCLGTKLKICKAICCTPGEKIHRVTPAKSTTDLPEIHREGAVPPFSLTPVEGTINPA
YEISTERGASPFPDILTPD
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgatggaatatggcgtcacagaacggtggatgcgacacgccttccagaagttcggccgg
ttcctagcccggcacccgcacgccttcctcctctcttcgctccttatcgcaggaatcttg
gggggagggctcttcttcttaggaaacgagggttccatcgagaagctgtacacacctgaa
gacggtctgggaaaggttgagagggaatatgtacggacgcacttcccgattaacgactcc
gaacacttcctcccctcccgggcggtcacagcagggcgctacggggctgtgatcatcagg
ccccgaagggaagtctcagacaacgcgatggaaaaggcggttctggacgccgccgtttcc
ttacacacgaacatatcagagttagtaaccgaggagctaggactaagctatgccgatgtt
tgtgccaaatggcaagccgactgcgttgtcagtgggttggacttgctggagtttacggcc
acaagttttcctaacgttactgtaggctacccgtggacttccttaccaggtggtttaaga
acttttagcggagcgattcttggcgacgtgactcttaaagatgggacagagacggtcaag
aaagcgggagccataaaacttatgtaccatcttcgctcttctcaagaagaagacgacaga
aggagcgagatgtgggaggatgccttcctggacaaaatggcggcgttttcctctgacgtc
atcgccgtgacgtggtcgacgtcacactcgctggagacggagattgccgagatgacgaca
cgagccgtgccgaacttggcagcctacacggtgagcatgctgatggcattcgcggtgcta
tcgtgtgtgatgcgggacccggtccgcagtaagccgttcctggggatggtgggcgtgctg
ggggcggggatggccgtcatggccaccgtggggctcttctcttactgcggcgtcatgttc
aacaacctggtggcagccatgcctttccttgtcataggagtgggtgtggacaacatgttc
atcctgctggcggcgtggcgccgcaccagtccccggcgcagtgtggaggaacgggcggcg
gacaccttcacggaggccggtgtctccatcaccatcaccgccatgactaacgcgctcgcc
ttcgccgtgggagcaatcaccagtttcccgggtgtccggatattctgcatgtacagcggt
gtggccgtgctgttcgcctacctgttccagatcaacttcttcggcgcttgtctcatctac
gacgggatccgcgagcaccagaaccggcacttcctgacctgcctgccggtccccctcccg
acccaggccgaccggtccggctgctgccaacgtttctgctgtacgggggacgccgcggtt
ggaacccagaaggacggcgaagaccacaacgatcacctcctcatgcagttcttcaagaac
tactacggcccttttatgacaaagaagtgggtgaaggttgcggtgtttgcgatgtttttc
gggtacatcggggtgggttgttggggatgcacacagctaagggagggggtcccgctgagt
aagttagcgggggacgggtcgtacgtggcccgctatctcgaccaggacgaccggtacttt
agtaggtatgacgtcagggtcagtgtcatggtaacggagaggttagactattgggacccg
gatgtaaaggataggttggaagatctcttggctgattttgaagacaccgagtttacgtac
ggtaaaaacgagtccgaatcgtggctgcgcgtgtatcttaagttcacggggcaaattcct
ggcctcaacttgaccgataaaacggctttcatgacaggacttaaagaagtgtttcttaag
acaccgggtttagacagatactcgtacgacattcactttagcgaagacggcagcgaaatc
cttgcaagtcgcttctttgttcaaaccaaagaaatcgacgacacactcagagagaaacac
atgatgctcaaaatgagaggcgttgccaaaaacgcgccagtaagaaccatggtgtaccac
ccagcattcgtgtactttgaccagtacacagccattctaccaaacacactgcaaaacttg
ggtatagccaccgtagctatgctatttgtatccctaattcttatgccacaccctatacac
gcggtttgggtgacacttgctatcgcttctatatgttcgggcgttgtaggtttcatgaca
ctttgggggacgaatctagacaacatttctatgataagtctcatcatgtgcatcgggttt
tccgtagacttctcagcacactttatctactcctttgtgtccgcggaagagagttcgcaa
aatgccaaagctgtccacgcgctgtacagtctaggagtacccatactccaaggttcaatc
tcaaccgttcttggcgtagctgctctaagcaatgcaccgtcttacggttttagaacgttc
tttaagaccgtattcttagtcgtggtgttcggcctccttcatggtatagtgtttcttccg
gttatgctgtcttgtcttgggacaaaacttaagatttgtaaggcaatatgttgcacccca
ggtgagaaaatacaccgcgtcacacctgcaaaaagtacgacagatctaccagagatacat
agagaaggagctgttccaccttttagtctcacccctgtggagggaactataaacccggct
tacgagatatcaacggagaggggggcgtcgccattccctgacattcttacgccagactag
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