Branchiostoma floridae (Florida lancelet): 118412716
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Entry
118412716 CDS
T01074
Name
(RefSeq) DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118412716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118412716
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
118412716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ZGRF1-like_N
Motif
Other DBs
NCBI-GeneID:
118412716
NCBI-ProteinID:
XP_035671636
UniProt:
A0A9J7KWP8
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All DBs
Position
3:27866712..27878977
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AA seq
972 aa
AA seq
DB search
MRRSAAPSQLHAAKRPRFNPPFATPQVTKPWVQQEPTKASQTTPVLRGPAAQPASSKSQP
KHRLLSILETPKPAYHNGNEPTINHNSSDLQNTPNFALSHLDQWEEEDENQPEGTVRPQT
SCQNVDNHKQQLRPVLGQKFSTQKPLVHVQPKHNSVNSTGPGEGSVQARYYNVMWCKVSG
RKHKRWEGDAVLVVHKRSVELLDTEGKKIGGASGYKATELSEMTEGQTLKVGGKEVEIYD
EISLEDWNSGKCFQSIASSSSPDPAPTKVQPKPKPFTNPMKDKQAATQRKSAGGGGAPQT
VAPRFDPTAEGVLVMPRPSPAHQWKYNPAGQPLVDVVVDPHLSRHLRPHQRDGVIFLYLC
VMGMRDHPGLGAILADSMGLGKTLQCITLIWTLLKQGPYGGKPVLHRILIVTPGSLVKNW
VKEFKKWLGNERCKVYAVGQDSRVDEFARSPLYPVMIISYEMLVRYVRDIEKINFDLIVC
DEGHRLKNTNIKTTSSISGLSARRRIVLTGTPIQNDLQELHSIVDFCNPGVLGPITAFRK
VYEEPIVRSHQPGATEAEKTLGATRAEELSRLTGQFTLRRTEDVNNKYLPSKVEAVVFCR
PTPLQLDIYRKLLCSRVLKSFLYSNRPTDGSLHLMCISALKKLCNDPCLIYTAAKEAEDK
APSFLEDEDELFGFDQVEESIYKDVLSLFPRGYDPNSSSPEYSGKLQVLADLLGSLYSEG
PRERIVVVSNYTQTLDMVQGLCKSQGYGYLRLDGSTPTGKRQQIVERFNDKYCRDFVFLL
STKAGGVGLNLIGASRLVLYDIDWNPANDLQAMARVWRDGQPRVVHIYRLITTGTIEEKI
YQRQISKQGLSGAVVDAKSSSKVQFSAEDLKDLFTLHEDTDSVTHDLLDCAVPGGDCSGC
PGSDRPQTSAVSRPCQLGQPQSASLLKSNLSMAELLGWTHYRGPLEHQDIQDYHLLSSAE
NISYVFVNETNS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgagacgatcagctgccccatcccagcttcatgctgccaagaggccgaggtttaaccct
ccctttgctacaccacaagtcaccaagccatgggtacaacaggaaccaactaaagcatct
caaacaacacctgtgttaagaggaccagcagctcagcctgcatcttccaagtctcagccc
aagcatcgtctcctcagcattttagaaacacccaagccagcataccacaatggaaacgaa
ccaaccatcaatcacaatagttctgatctacagaatactcccaacttcgctctatctcac
cttgaccaatgggaagaggaggatgagaaccaaccagagggcactgtacgaccacagact
tcctgccaaaatgtggacaatcataaacaacagttacgacctgttctgggtcaaaagttt
tcaacgcaaaaacctttagttcacgtacaacccaaacataattctgtcaatagtacaggc
cctggagagggtagtgttcaggctcggtactataatgtcatgtggtgtaaggtgtcaggg
aggaaacacaagagatgggagggtgatgcagtactggtagtgcacaagagatcggtagaa
ctgttagacacggaagggaagaagatcggtggagcgagtgggtacaaggcaacagagctg
tctgagatgactgagggacagacactgaaggtgggagggaaggaggtggagatatatgat
gagatctcccttgaagactggaattctggaaagtgcttccagagtatagcaagctcttca
tctcccgaccctgctcctacaaaggtgcagcctaaacccaagcctttcactaaccccatg
aaggacaagcaggctgcaacacagagaaaatcagcagggggaggcggtgcaccgcaaact
gttgcaccaaggtttgaccctacagctgagggggtgctggtgatgcctcgcccctcccct
gctcaccagtggaagtacaaccctgccggtcagcccctggtggacgttgtagtggaccct
cacctgtccagacacctcaggccacaccagagagacggggtcatcttcctgtacctgtgt
gtcatgggcatgagggaccatccaggcctgggtgctatcctggctgactccatgggcctg
ggtaagactctgcagtgtatcaccctgatatggaccttactgaagcaggggccttacggg
ggcaagccagtcctgcacaggattcttattgtcactccaggtagtcttgtcaagaactgg
gtgaaagaattcaagaaatggctggggaatgagcgctgcaaagtgtatgcagtggggcag
gacagcagagttgatgagtttgcccggtctcccctctaccctgtcatgatcatcagctat
gagatgctggtcaggtatgtcagggatatagagaagatcaactttgacctgatagtgtgc
gacgagggccaccggctcaagaataccaacatcaagaccacctcctctatctcagggcta
tcagctaggagaaggattgtgctgacaggtactcccatccagaatgacctccaggagctc
cactccattgtagacttctgtaaccccggggtgttggggccgatcacggccttcaggaag
gtgtatgaggaaccaattgtcagatcccatcagcccggtgctacagaggcagagaaaacg
ttgggcgcgacacgtgcagaagaactgtctcgcctcacgggccagttcacgctgcggcgg
acagaagacgtcaacaacaagtacctcccgtccaaggtggaggctgttgtcttctgcaga
cccacccccctgcagctggacatctacaggaagctgctctgttccagggtgctcaagtcc
tttctttacagcaatagacccacagatggcagtttacacctgatgtgtatctcagcccta
aaaaagctgtgcaatgatccctgcctgatctacactgctgcaaaagaggcagaagacaag
gctcccagtttcctggaggatgaagatgaactgtttgggtttgaccaggtggaagagtcc
atctacaaggatgtgctatcactctttcccaggggatatgatccaaacagttcaagtcca
gagtattctggtaagctgcaggtcctggctgacctactagggtccttgtactcagaagga
cccagagagaggattgtggtggtgtccaactacacacagaccttagacatggtacagggg
ctgtgtaaatcacaaggttatggttatctaaggctggatgggagcacacctactggcaag
agacaacagattgtggagagattcaacgacaagtactgcagagactttgtgttcctcctg
agtaccaaggctggtggggtggggctgaacctgatcggagcgtctcgcctggtcctgtac
gacatcgactggaaccccgctaacgacctgcaggccatggcacgtgtgtggcgggacggc
cagcccagggtcgtacacatctacaggctcatcactactggaaccatagaggagaagatc
taccagcgacagatcagtaaacagggtctgagtggggcggtggtggatgccaagagctcc
agtaaggtgcagttctcagcagaggacctgaaggatctcttcactctacatgaggacaca
gacagtgtcacacatgacctgttggactgtgctgtgcctggtggtgactgttcaggctgc
cctggctcagaccgaccccagaccagcgcggtgtcgcgcccctgtcagctgggccagccc
cagtctgccagcctgctgaagtctaacctgtccatggcagaactgctggggtggacacac
tacagggggccgctggagcaccaggacatccaggactaccatctgttgtcttcagcagag
aacatcagctatgtctttgtcaatgaaactaacagttaa
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