Branchiostoma floridae (Florida lancelet): 118412841
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Entry
118412841 CDS
T01074
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04150
mTOR signaling pathway
bfo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118412841
04150 mTOR signaling pathway
118412841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118412841
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118412841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
EGF_LRP2
Vgb_lyase
SGL
cEGF
Motif
Other DBs
NCBI-GeneID:
118412841
NCBI-ProteinID:
XP_035671775
UniProt:
A0A9J7KXE6
LinkDB
All DBs
Position
4:complement(6796621..6839747)
Genome browser
AA seq
1635 aa
AA seq
DB search
MMARAGLLLLGSLCAAFQVALPNPRLLFANRRDVRIIDAGPGRGHNSTVVVSNLEDAAAL
DFIYDQNVIYWTDVSLEMIKMIYTNGSGIVTDVISTGLVSPDGLACDWIGRKLYWTDSET
NRIEVSNLDGTSRKVLFWEELDQPRAIALDPARGFMFWTDWGEVPKIERAGMDGTGRRVV
VDDNIYWPNGLTLDYAELRLYWADAKLQLIHYANFDGSERRAVVEGSLPHPFALTLYGDT
IYWTDWQTNSIHSCHKISGEDKQVIHSEIFSPMDIHAYMPARQLMRHTNPCQPNNGGCSH
LCLMSPDAPNYRCACPTGVKLLDDERTCADGASEILLLARRTDLRRISLDTPDYTDVVLQ
IDDIRHAIAIDYDVVEGFVYWTDDEARAIRRARLDGSGVEYLITTEVEHPDGIAVDWVAR
NLYWTDTGTDRIEVTRLNGTSRKILIAENLDEPRAIVLDPSEGYMYWTDWGQHPKIERAE
LDGSHRVVLFNTSLVWPNGLAIDYQSRRIYWGDAKTDKIEYANLNGTGRTILVDEKLPHI
FGFSLLGNYIYWTDWQRRSIERVHKTTGEDRQIIVDQLPDLMGLKAVNVQRTDGWNPCVD
NNGGCSHLCLYRPSGVSCGCPMGLELITDMRTCIVPEAFLLFSRRADIRRISLETNNNDV
VIPLPGVKEASALDFDINDNRIYWTDVSLKSISRAFMNGSSAEKIIQFGLDYPEGMAVDW
VAHNLYWADTGTNRIEVARLDGSSRKVLVWQDLDNPRSLALDPAFGFMYWSEWGGDPKIE
RASMDGTNRFILVDSLGRANGLTIDYPERRLYWADLDTNLIESSNMLGNDRKRVISDNLP
HPFGLTQYQDYVYWTDWNTRSIERANKTTGENRTRIQGSLDYVMDIMDILVFHSSRQSGW
NQCAVNNGGCSHLCLATAMPSSTSAESAMDLPVMCGCPSHWKLDPDNRTCHPPASFLLFS
QRNLISRMVFDEQQSPDIVLPIHQLRNVKVIDYDRMGEHIYWIDGRIKQLKRAKANGSEV
TSVVANLDSLFYPIDMAIDEFSRHIYWTCSQTNTINVTRISDLSPVGVVVSGDKERPRSI
VLDPKRGYMYWTNMVSNPSIEKAALDGTERQTLFSSDIKQPGPLAIDTKYGKLYWTDIEL
NRIESSGLDGANRQVLVEQMIIQLSGLTIFGDHLYWIDRAKQIVESVDKLTGSGRTRIQA
RLVHLSDMVGVDSKDITEMNHHPCAIDNGGCSHICIAMKDGRSRCSCPLHLVLFPNELQC
GEPPTCAPDHFTCETGEVDCIPLLWKCDGVAECSDGSDEADCPKCTEDQFTCDSGQCVDG
QKVCDGKEDCMDRSDEMQCHSTCAPDQFLCRNGLCIEQEKRCNNEKDCVDNSDEDDCDPK
GDLRTYGNEDSNSLTIAVVISAIMAVLIIFMMVFVWRKLKRQQEDGFTNDIVMVTNGNVP
TMVALPPSAGTNSLPRSVSGLSTSRGKSATTCLSSSSVPGSGCGPPLYDRTHVTGASSSS
TGSLGTHYPHETLNPPPSPATDRSQYTADLFYSSRSSQSPSTVRSYKHYKFRNVPPPPTP
CTTDGCEDSEPYPLRGLRPKYYDMNYDSDPYPPPPTPRSHYMSDNNCDSCPPSPSTARSY
FHPYVPPPSPATDSP
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgatggccagggcagggttgctgctgctcggcagcctgtgcgcggctttccaagttgcg
cttccaaatccaagacttttatttgcgaacagaagagacgttcgaattatagacgctggg
ccggggagaggacataacagtactgttgtggtcagtaatctggaggatgcggccgcgtta
gacttcatctacgatcaaaatgtaatatactggaccgacgtcagtctggagatgatcaaa
atgatttacacgaacggttccgggatcgtgacggacgtgatttccacggggttggtatcc
ccggacggattggcgtgcgattggataggtagaaaactgtactggacagactcggagacc
aataggatcgaagtgagtaaccttgatgggacgtcacggaaagttctattctgggaggag
ttggaccagcccagggcgatagcactggatccagcgagagggtttatgttttggacagac
tggggggaggtgccgaagatcgagcgggcggggatggacgggacagggaggagggtcgtt
gtcgacgacaacatctattggccgaacggcctgacgttagactacgccgagctgcggctg
tactgggcggacgcgaagctccagctgatccactacgccaacttcgacgggtcggagcga
cgcgcggtcgtggaaggctctctacctcaccccttcgcgctgacgctgtacggggacacg
atatactggacggactggcagaccaactcgatccactcctgccacaagatctccggggaa
gacaagcaggtcattcacagcgagatcttctctcccatggacatccacgcctacatgccg
gccagacaactcatgagacacaccaacccctgccagcccaacaacggaggctgttcccac
ctctgtctgatgtcacctgatgcccccaactacagatgtgcctgccccaccggagtcaag
ctactggacgatgaaagaacatgtgccgacggagcaagcgaaatccttctgctggcgaga
agaacagacttgcggaggatatcgctggacacgccggactacacagacgtggtactacag
atcgatgacatcagacacgccatcgctatcgactacgacgtggtggaagggttcgtgtac
tggacagacgacgaggctagagctatcagacgagcaagattagacggctcaggtgttgaa
tacttgattacaacagaggtagaacaccctgacgggatcgcagtagactgggtagcaagg
aacttgtactggacagacacgggcactgacagaatagaggtcaccagactaaacggaaca
tcgcggaaaatcctgatagccgaaaacctcgacgagcccagagccattgtgctggaccca
tcagaaggatacatgtactggacagactggggccagcatcccaaaatcgagcgagccgag
ctggacggcagccatcgagtcgttctgttcaacacgtcgctggtctggcccaacggtctg
gccatcgactaccagtccaggagaatatactggggcgacgccaaaaccgacaagatcgaa
tacgccaacctgaatgggacgggtcgaactatccttgtggatgagaagcttccacacatc
tttggtttcagtttgctgggaaattacatctactggacggactggcagagacggagcatc
gagcgcgtgcacaagacaacaggggaggaccggcagatcatcgtggaccagctgcctgat
ctgatgggtctgaaggctgtcaatgtgcagaggacagacggctggaacccgtgtgtggat
aacaacggaggctgctcgcacctctgcttgtaccgaccgtcgggcgtctcctgcggctgt
ccgatgggcctggagctcatcacggacatgcggacgtgcatcgtgcccgaggccttcctc
ctgttctcgcgccgcgcggacatcaggagaatatcgctggagacgaataacaacgacgtg
gtgatacctctgccgggcgtgaaggaggccagcgctctcgactttgacatcaatgacaac
agaatatactggactgatgtcagtttgaagtccatcagtcgagccttcatgaacggcagc
agcgccgagaagatcatccagttcggcctggattacccagaaggcatggcggtggactgg
gtggcgcacaacctgtactgggcggacacggggaccaaccggatcgaggtggcgcgactg
gacggatcgtccagaaaagtcctggtctggcaggacttggacaatccccgctccctggcg
ttggatccagcgtttgggttcatgtactggtcggagtggggaggtgacccaaagatcgag
cgggcctccatggacggtactaaccggttcatcctggtggacagtttgggccgcgctaac
gggctgaccatcgactacccggagagacggctgtactgggcagacctggacaccaacctt
atagagtcttctaacatgctaggcaatgatcgtaagcgggtgatctcagacaacttgccc
caccctttcggcctgacacagtaccaggactatgtgtactggacagattggaacacacgt
agcatcgaacgggccaacaagacaacaggcgagaaccgaacccgtatccagggctccctg
gactatgtgatggacatcatggatatcttagtgttccactcatccagacagtcaggctgg
aaccagtgtgcagtaaacaacggcgggtgttcccacctgtgcctggccaccgccatgccg
tcctccacgtctgcagagtccgccatggacctgcctgtcatgtgtggctgtccctcgcac
tggaaactggacccggacaacaggacatgtcatccccctgcgtcatttctgctgttcagc
cagcgtaacctgatcagtcgcatggtgttcgacgagcagcagagtccagacatcgtgctg
cccatccaccagctgcgcaacgtcaaggtcatcgactacgaccgcatgggggaacacatc
tactggatcgacgggcgcatcaagcagctcaagagggctaaggccaatggctcggaggtg
accagtgtggttgcgaacctggacagtctgttctacccgatcgacatggccatcgacgag
ttctctcgccacatctactggacctgctcgcagaccaacaccatcaacgtcacgcgcatc
agcgacctgtcgcccgtcggagtcgtggtctccggggacaaggaacggccgcgctccatt
gttctggacccaaagagggggtacatgtactggaccaacatggtcagcaatccatccatc
gagaaggctgccctggacgggacagagcgccagacgctcttcagcagcgacatcaagcag
ccaggaccgctcgctatcgacacgaagtacggcaagctgtactggacagacatcgaactg
aacaggatagagagctccgggctggatggtgcgaatcggcaggtgctggtggaacagatg
attatccagctgtctggactgaccatcttcggcgaccacctgtactggatcgaccgcgcc
aagcagattgttgagtcggtcgacaagctgacaggcagtgggagaactaggatccaggcc
aggctggtccatctcagcgacatggtgggggtggacagcaaggacatcacggaaatgaac
caccatccctgtgccattgacaacggcggctgttcccacatctgcatcgcgatgaaggac
ggccggtctcgctgctcctgcccgctccacctggtgctgtttcccaacgagctgcagtgt
ggagagcccccaacctgtgcccccgaccacttcacttgtgagacaggagaagtggactgt
atccccttgctgtggaaatgtgacggagtggccgagtgttccgatggtagtgacgaggca
gactgtcccaagtgcacagaggaccagttcacgtgtgacagtgggcagtgtgtggatggg
cagaaggtgtgtgatgggaaggaggactgtatggaccggtcggacgagatgcagtgccac
agtacctgtgcaccagaccagttcctgtgcaggaatgggctgtgtattgagcaggagaag
agatgtaacaatgaaaaggactgtgtggacaactctgatgaggacgactgtgatccaaaa
ggcgatctgcgtacctacgggaacgaggacagcaactctctgaccatcgccgtggtgatc
agcgccatcatggctgtcctcatcatcttcatgatggtcttcgtgtggaggaaactcaag
cggcaacaggaggacggattcaccaacgacatcgtcatggtaaccaacggcaacgtgcca
acgatggtggctctcccgccgagcgcgggaacaaactcgcttccaagatctgtatcaggc
ctgtccacgtcacggggaaaatcagctaccacttgtttatcatcaagttctgtacctgga
tccggctgcgggcctccgctgtacgaccgtacgcacgtgacgggagcctcctccagcagt
acaggttccctgggcacgcactacccccacgagaccctcaaccccccgcccagtcccgcc
accgaccgttctcagtacactgcggacctcttctactcctcgcgcagctcgcagagcccg
tcgactgtcagatcgtacaaacattacaagttcagaaacgttcctccgccgcccacgcca
tgcacgacagacggttgtgaggacagcgaaccgtacccgttgcgggggttgagaccgaag
tactacgacatgaactatgactcggacccttaccctcctcctccgacgcccaggagtcac
tatatgtccgacaacaactgcgacagctgtccaccgtcgccttccacggcgagaagttac
ttccatccgtacgtccctcccccctcacccgcgacggactctccctag
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integrated database retrieval system
