Branchiostoma floridae (Florida lancelet): 118412946
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Entry
118412946 CDS
T01074
Name
(RefSeq) nuclear pore complex protein Nup107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118412946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118412946
03036 Chromosome and associated proteins [BR:
bfo03036
]
118412946
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118412946
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118412946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
118412946
NCBI-ProteinID:
XP_035671909
UniProt:
A0A9J7KYH7
LinkDB
All DBs
Position
4:complement(20630535..20642507)
Genome browser
AA seq
976 aa
AA seq
DB search
MASAGKKNFQSDRKPPGDRLSASFTDTADSTIGVIWQMSQEGEFNPSAMDEALDKRRQLR
KNFRPSFPTAALAASPAVRQEAASRTLRRRSTNVEKSLQLLDQAVGTTPGPVLRMARTPA
SQLRHTSYTPRPVPSTSQFDVSMTLGMTPAKSMPLSQSMVHTPAQRPPSTMEMFTPGGVT
EDITSTNMSLLLEEDPGLAASSGVYTDFMQCLRGKPTSKEVFELLDEYQQVCCEQVSLLK
RIVKKVTTVQNKFQLTLTVLQLLQQEKCTWRLLFSMYKDRIQSEFSESEAMMTDLVNNNV
SERKIVEALFDREASTRQSQLVIDWLERNAADEVVDFYEKVEFYSQSVCWENTLHTLQQG
TGLAQGSRALVTEMDPDAPIRQQRLLADLDKEDEVRLLKYIFTYLRAGQLEEAQRLCRKC
GQSWRAATLEGWRLYHDPNMEGVSSELAPVEGNPNRDVWKTVCWRMAQDEHVHMYERAIY
AALSGNLKELLPACESWEDWLWAYYKVMVDSRVEQEIRTVRGDRPLEPLPPAYWDKVLTP
EAIFKELQSSPHDGVKSEAEEPFHTIQKYIILGDVDGLIETMSEWINGDSSPHQHLVRFM
AHLVLFFRSIGVHTKDELCTAILEHYVRTLIDAGETQLVAFYTATLPLDRQVLLYAHFLE
RVEEHAERQMCLELAEEAGLDIPTITKTVVENIRTRDQGDFKVGVEITAALEAATSEDDR
RKIRAIDWLVFDESQRAEALKQSNAVMRTFLAMKKHTAAKEVFAKIPTGSVDVINRQWQI
QNGSAPLPAEDDNAIREYICIQTYIMAHDEFNDWFSHFHHNKPQRPKLQEGANFTEKVKH
EHREQEYKVELSRWHHTLSSQTEEVVTKIYNVLLFPDGWMVDQRMESLEDEGRTHQLDLL
RQLCLPTMCLLLHTILHQTGRYADCMVLADTIASEQHQLYTVFRRDELQRFLQKLRDSSI
QLLDQNLDPLGYQMSS
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcgggaaaaaaaaatttccagtctgatcggaaacctccgggagatcggctg
tctgcgtccttcacggacaccgcagactccaccatcggggttatttggcaaatgtcacag
gaaggagagttcaacccaagcgcgatggatgaggctttggacaagagacgacagctccgc
aagaacttcaggccatcgttcccgactgcggccctcgcagcgtcccccgcggtacgacag
gaggcagccagcaggacgctacgcaggagaagcactaatgtggagaaatccctccagctc
ctggaccaggcagtcggcaccacccctggcccggtgctgcggatggcgcgtacaccggcg
agccagctgcgtcacaccagctacacgccgcgccccgtcccctccacctcacagtttgat
gtcagcatgaccctgggaatgacccctgccaagtccatgcctctatcacagtctatggta
cacacacctgctcagaggccaccttccactatggagatgttcaccccaggtggggtcact
gaggacatcacatctaccaacatgtcactactactggaggaggatccaggcttggcagca
tcctcaggtgtgtacacagacttcatgcagtgtctgcggggcaagccgacctccaaggaa
gtgtttgagctgctcgatgagtaccagcaggtgtgctgcgagcaggtgtccctgctgaag
aggattgtgaagaaggtgacgacagtgcagaacaagttccagctgaccctgacagttcta
cagctgttacagcaggagaagtgcacctggagactcttgttctccatgtacaaggacaga
atccagtccgagttctcggagtcagaagcaatgatgacagatttggtcaacaacaacgtg
agcgagcgcaagatcgtggaggcactgtttgatcgggaagcctcaaccagacagagccag
ctggttattgactggctggagagaaacgcagcagacgaggtggtagacttttacgagaaa
gtggagttttactcccagtcagtttgttgggagaacacactccacacactacagcaggga
accggcctggcccagggtagcagggcgctggtgacggagatggaccctgatgcacccatc
cgacagcagcgcctcctagcggatctggacaaggaggatgaagtgcgcctgctgaagtac
atttttacctacctgcgagccgggcagttggaggaggcccagagactgtgtaggaagtgt
ggccagtcctggcgagcagccactcttgaaggatggagactctaccatgatcctaacatg
gagggggtttccagtgagttagcaccagtagaagggaaccctaaccgagatgtgtggaag
acagtgtgctggaggatggcgcaggacgaacacgttcacatgtacgagagagcgatatac
gctgcactaagcgggaacctgaaggagctgttgcctgcctgtgaatcctgggaagactgg
ctgtgggcttactacaaggtgatggtggactcccgcgtggagcaggagatccgcacggta
cggggggaccgcccgctggagcccctcccacctgcatactgggacaaggtcctaacacca
gaggccatcttcaaggaactccagtcatctcctcatgatggagtgaagtcagaagcggag
gaaccgttccacaccatccagaagtacatcattctgggggatgtggatgggttgatagag
accatgagtgagtggataaatggtgactcctctccccaccaacaccttgtgcgtttcatg
gcccacctggtcctgttcttccgttccatcggagtccacaccaaagatgagctgtgcaca
gctatactggagcactatgtcaggaccctgattgatgcaggtgagacccagctggtggca
ttctacacggccacgctgcctctggaccgacaggtgctgctgtatgcacacttcctggag
cgagtggaggaacacgctgagcggcagatgtgcctggagctggccgaggaagccgggctg
gacatccccacaataaccaagacagttgtagagaacatccgcacccgcgaccaaggtgac
ttcaaggtcggtgtggagatcacggctgccctagaggctgccacatccgaagacgacagg
cgaaagatcagggccatcgattggctggtgtttgacgaatcacagcgggctgaggcgctg
aagcagagtaatgccgtgatgcgaaccttcctggccatgaagaagcacacagcagcaaaa
gaagtctttgcgaagattcccaccgggtccgtggatgtcatcaaccggcagtggcagatt
cagaacgggagtgcaccgcttcctgctgaagacgataacgccatcagggaatacatctgc
atacagacctacattatggcacatgatgaattcaatgattggttctcgcactttcaccac
aacaagccacaaaggcccaaactacaggaaggggcaaacttcacggagaaggtgaaacat
gaacacagagagcaggagtacaaggtagagctcagcaggtggcaccacacgctgtcctca
cagacagaagaagtcgtcactaagatctataacgtgctgctgttccccgatggctggatg
gtggaccagagaatggagagtctggaagacgaggggcggacccaccagctggacctgctg
cggcagctgtgcctccccaccatgtgcctcctgctgcacaccatcctgcaccagactggg
cgctatgcagactgcatggtgctggccgataccattgcgtctgaacaacatcaactctac
actgtcttcaggagagatgagctgcagaggtttctgcagaagctgcgggactcctccatc
cagctgctggaccaaaacctcgaccccctggggtatcagatgtcatcttag
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