Branchiostoma floridae (Florida lancelet): 118413023
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Entry
118413023 CDS
T01074
Name
(RefSeq) beta-TrCP-like isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04120
Ubiquitin mediated proteolysis
bfo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118413023
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118413023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118413023
03036 Chromosome and associated proteins [BR:
bfo03036
]
118413023
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118413023
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
118413023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
Beta-prop_RIG_2nd
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_DCAF4
WD40_like
Beta-prop_IP5PC_F
F-box
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR11_2nd
F-box_5
Beta-prop_VPS8
Beta-prop_RIG_1st
DUF4508
DUF6188
Motif
Other DBs
NCBI-GeneID:
118413023
NCBI-ProteinID:
XP_035672042
UniProt:
A0A9J7KXL0
LinkDB
All DBs
Position
4:complement(13712349..13726391)
Genome browser
AA seq
530 aa
AA seq
DB search
METDTIGDEKIEETKLRQMTILAQPIQKKRERPENFEEERDLCVKYFEQWSEQDQLDFVE
QLISRMCHYQHGHINAFLKPMLQRDFITALPKKGLDHVAEQILSYLDAKSLSACELVCKE
WYRVISDGMLWKKLIERMVLTDPLWKGLAERRGWGQHLFRPKPGETQPNHQFYRKLYPRI
IQDIEQIETNWRCGRHNLQKIQCRSENSKGVYCLQYDDNKIVSGLRDNTIKIWDRNNLEC
VQVLTGHTGSVLCLQYDDQVIISGSSDSTVRVWNVHTGEMVNTLIHHCEAVLHLRFQHGM
MVTCSKDRSIAVWDMQSPTDINLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTST
CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRILEGHEELVRCIRFD
NKRIVSGAYDGKIKVWDLQAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD
TILIWDFLNVPPPDPPARSPARTYTYVSNTEQVYLDQVDVPAEDATEDGT
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagacactataggagatgaaaaaatagaagaaacgaagttacgacagatgacc
atcctagctcagccaatccagaaaaagcgagagcggcccgagaattttgaggaggagcga
gacttgtgtgttaagtactttgaacaatggtcagaacaggaccagctggactttgtggag
caactgatatctcgaatgtgccactaccagcatggacatatcaatgccttcctcaagccc
atgctgcagagagacttcattactgcattacccaagaaaggcctagaccatgtagcagaa
caaatactgagttacctggacgccaagtccttgtcagcttgtgagctggtgtgcaaggag
tggtaccgggtcatctctgatgggatgctgtggaagaagctaatagaaagaatggtgctg
acggatccgttgtggaaagggctggcagagcgcaggggatggggacaacatctcttcaga
ccaaagccaggggaaacgcaacccaaccatcagttctaccgcaaactgtaccctaggatt
atacaagatattgagcaaatagagacaaactggcggtgtggcagacataacctacagaag
atacagtgccgaagtgagaacagcaagggggtgtactgtctccagtatgatgacaacaag
attgtcagtggacttagagataacactatcaagatctgggatagaaacaacctggagtgt
gtgcaggtgctgactggacacactgggtcggtgctgtgcctacagtacgacgaccaggtc
atcatctctggttccagcgactcaacagtcagggtgtggaacgtccacacaggtgagatg
gtgaacacactgatccaccactgcgaggctgtgctgcatctcaggtttcagcacggcatg
atggtcacctgttccaaggaccgctccatagctgtgtgggacatgcaatccccgacagac
atcaacctcagaagagtcctggtggggcaccgggctgccgtcaatgtggtggactttgat
gacaagtacatcgtatcagcgtctggggataggacaatcaaggtgtggagcacatcaaca
tgtgagtttgtgagaacactgaacggccacaagaggggcatcgcctgtctgcagtacaga
gacagactcgttgtcagtggttcgtcagacaacaccataaggttatgggacatagagtgt
ggagcgtgcttgcgtattttggaaggtcacgaggagttggtgagatgtatcaggtttgac
aacaagagaatcgtcagtggagcatatgatggtaaaatcaaggtgtgggacttgcaggca
gcgttggaccctcgagcgccagctggcaccctttgccttagaaccctagtggagcactct
ggaagggtgttcagactacagtttgatgagttccagattgtcagtagttcccatgacgac
accatactgatctgggacttcctgaatgtgcccccgccggacccgcccgctcgctcccct
gcccggacgtacacctatgtctccaacactgaacaagtgtacttggaccaagtagacgtt
cctgcagaggatgctaccgaggatggcacgtga
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