Branchiostoma floridae (Florida lancelet): 118413024
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Entry
118413024 CDS
T01074
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118413024
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bfo01009
]
118413024
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118413024
03036 Chromosome and associated proteins [BR:
bfo03036
]
118413024
Protein phosphatases and associated proteins [BR:
bfo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
118413024
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
118413024
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
118413024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
DUF6816
Motif
Other DBs
NCBI-GeneID:
118413024
NCBI-ProteinID:
XP_035672045
UniProt:
A0A9J7KXW8
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All DBs
Position
4:complement(13669665..13704073)
Genome browser
AA seq
494 aa
AA seq
DB search
MAGGGDIQWCFSQVKGTVEEDVTEGEAPPHHYLSVDPDGDSWEYENGTRETEHMLPGSED
VGSDCEDGDICNADIISTVEFNQDGELLATGDKGGRVVIFKREPPETKQSLPRRGEYNVY
STFQSHEPEFDYLKSLEIEEKINKIRWLPRQNAAYSLLSTNDKTVKLWKITERDKRPDGF
NLKDDEGRIKNPNDITALRVPFFKPTELIVEASPRRVYANAHTYHINSISLNSDHETFLS
GDDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPSMCNVFVYSSSKGTIRLC
DMRQRALCDQHSKMFEEPEDPSNRSFFSEIISSISDVKFSHSGRYLISRDYLSVKVWDLQ
MDSRPIETYQVHEYLRSKLCSLYENDCIFDKFECAWNGTDSQIMTGSYNNFFRMFDRNTK
RDLTLEASRENTKPKCILKPRRVCTGGKRKKDEISVDSLDFNKKILHTAWHPTENIIAVA
ATNNLYIFQDKDKV
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggctggtggtggtgacatacagtggtgcttctcccaggtgaaagggactgtggaagag
gacgttactgaaggtgaggcccctccccatcactacctgtcagtggacccagatggggac
tcttgggaatacgaaaacggtactcgcgagactgagcacatgttgccaggaagtgaagat
gtaggctcagattgtgaagacggcgacatttgcaatgccgacatcatctccactgtagag
ttcaaccaggatggcgagctgctggccacgggagacaagggaggccgtgtggtcatattc
aagagggagccgccagagacgaagcagtccctgcccagacgaggagagtacaacgtgtac
agcactttccagagccatgaaccagagttcgactacctgaagagcttagaaatagaagag
aaaatcaacaaaataagatggttacctcgacagaatgctgcgtatagccttctatctact
aatgataaaactgtcaaattgtggaaaatcactgagcgagacaagcgcccagacggcttc
aatctgaaggacgatgagggtcggataaagaatccaaatgacatcacggcattgcgggta
ccgttcttcaagcccacggagttgatagtagaagccagcccccgccgggtgtacgccaat
gcgcacacataccacataaactccatatctctaaatagtgaccatgaaaccttcctgtct
ggagacgacctcagaatcaacctctggcatctagaaatcacagaccgaagttttaatatt
gtcgacatcaagccagccaacatggaggagctgacagaagtcatcacagcagcagagttc
caccccagcatgtgcaacgtctttgtctatagcagtagcaaaggcaccattaggttatgt
gacatgaggcaaagggcactgtgcgatcaacattcaaaaatgtttgaagagccagaagac
ccaagcaaccgttccttcttctcagagattatatcatccatttccgatgtgaaattctcc
catagtggcagatacctcatctctagggactatttgtcagttaaggtctgggatctacaa
atggactccagaccgattgagacgtaccaagtacatgagtatctccgtagcaagctctgc
tcactgtacgaaaatgactgtatcttcgacaagtttgagtgtgcttggaacggaactgat
tcgcaaatcatgacaggctcctacaacaacttcttcagaatgttcgaccgcaacacaaaa
cgtgacctgacgctggaggcgtcgcgggaaaacacgaaaccaaagtgcatcctgaagccg
cgcagggtgtgcacgggcgggaagcgtaagaaggacgagatcagcgtggacagtctagac
ttcaacaagaagatccttcacaccgcctggcatccaacagaaaacatcattgccgtagcc
gccactaacaacttgtacatcttccaggacaaggacaaagtgtga
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