KEGG   Branchiostoma floridae (Florida lancelet): 118413030
Entry
118413030         CDS       T01074                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Pathway
bfo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118413030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bfo03041]
    118413030
Spliceosome [BR:bfo03041]
 Complex A
  U2 snRNP components
   U2 related factors
    118413030
 Complex B
    118413030
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 118413030
NCBI-ProteinID: XP_035672053
UniProt: A0A9J7KYI1
LinkDB
Position
4:12296646..12307499
AA seq 541 aa
MQGAEMAATMDASSQLPNGDVKQNGDGEPLSKKIKTEDIKGDEGKGKAPGLPPLTKDQQE
AVTKAKKYAMEQSIKSVLVKQTIAHQQQQMTNLQIAAQRQRALALMCRIYVGSIYYELRE
DTLKQAFSPFGPIKNIDLSWDPLTMKHKGYAFIEYEIPEAAQLALEQMNGVMLGGRNIKV
GRPSNMASAQPIVDQLVEEAKHYNRIYVSSVHPDLAADDIKSVFEAFGKIKSCELAPDAV
TGKHKGYGFLEYEKPQSAQDAIASMNLFDLGGQYLRVGKAVTPPKHALNPQLQISSPAGP
GGLPPAAAVAAAAATAKITALEAVASTAAVVSGVQPGVSTISSTSQLLSQSMPGQPGLSI
PAPGLVQLPQPVMASSAPGLITGVTPMKPAVTTTSSAGPANEEQRKKVEDDLPQTLGQQE
NLSISGSNARHMVMQKLLRKSESNVMILRNMVGIEDLDDELEGEVTDECGKYGQVNRVII
YQERQGEEENADVIVKIFVEFSESFEAERGVQALNGRWFGGRKVSAESYDQLKFDSQDLS
G
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgcagggagctgagatggcagccactatggacgcgagctctcagctaccaaacggcgat
gttaaacagaatggagatggtgagcccctgtcaaagaagatcaagacagaagatataaaa
ggcgatgaaggaaagggaaaggcccctgggctaccaccactgaccaaagatcaacaagag
gcagtgacaaaggcaaagaagtatgctatggagcagagcatcaaaagtgtgctggtgaag
cagaccattgcacaccagcagcagcaaatgaccaacttacagattgcagcccagagacaa
agagccttggcccttatgtgcagaatctatgttggatccatctactatgagctgcgagag
gatactctgaagcaggccttcagtccatttggtcccatcaagaatatagacctgtcgtgg
gacccgctgaccatgaagcacaaaggctatgccttcatcgagtacgagatccctgaagct
gcccagctggctctggagcagatgaacggggtgatgttaggtggaagaaatatcaaggtt
ggtcgccctagcaacatggcgtcggctcagccaatagtagatcagcttgtagaggaggcc
aagcattacaaccgcatatacgtttcctcagtgcaccccgaccttgcggctgatgacata
aagagtgtgtttgaggcatttggaaagataaagtcttgtgagctggcaccagatgcagtc
actggaaaacataaaggttatgggtttctagagtatgaaaagccacaatctgcacaagac
gccattgcatcaatgaacctatttgaccttggaggacagtaccttagagtaggaaaggct
gtcacacctcccaaacatgcgctgaacccacagttacagatctcgtccccggctggacca
ggtgggctcccaccagctgctgctgtagctgctgcagctgccacagccaagatcactgcc
ctggaagctgtggccagtacggctgctgtcgtatcaggcgtgcagccaggggtgagtacg
atcagctcgacgtcacagcttctctcccagtcgatgccaggtcagcctggcctgtccatt
cctgccccggggttggtgcaacttcctcagccagtcatggcgtcatctgcaccaggtctc
atcacaggtgttacaccaatgaagccagctgtgaccaccacatcctcagcaggaccagct
aatgaggagcagagaaaaaaggttgaagatgacctaccacagacactgggtcagcaggag
aatctctccatctcaggcagcaacgcccgccacatggtcatgcagaagctgctcagaaaa
tcagaatctaatgtgatgatcctaagaaacatggtagggattgaggacttggatgatgag
ctggaaggggaagtgacagacgaatgtggcaagtatggccaagtcaacagggttatcatc
taccaggagagacaaggagaggaggaaaatgcagacgtcatcgtcaaaatatttgtggag
ttctctgaatcttttgaggctgaacgaggtgtccaggccctgaatggccggtggtttgga
ggcagaaaagtctcagcagagtcgtatgatcagctgaagtttgattcacaggatctatca
gggtag

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