Branchiostoma floridae (Florida lancelet): 118413060
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Entry
118413060 CDS
T01074
Name
(RefSeq) mutS protein homolog 4-like
KO
K08740
DNA mismatch repair protein MSH4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfo03036
]
118413060
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Meiosis-specific proteins
Others
118413060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
ATPase_2
AP1AR
AAA_21
AAA_28
LsmAD
AAA_27
Motif
Other DBs
NCBI-GeneID:
118413060
NCBI-ProteinID:
XP_035672096
UniProt:
A0A9J7MM24
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Position
4:4537451..4557035
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AA seq
822 aa
AA seq
DB search
MRAPTAQPGTARSFGSTSSSHRTPGSRRTPHSATGASSATPGVPLTANIIALVEGRGLAR
GEIGMATIDLKRPELIISQFSDSQTYVKTMTKINILQPIEIIMPNTACENGNMTKLFKLI
SDNFNSTNISTVQRKYFNETKGLQYVRQLCVPEFNSIEMEVASKYYSLACTAALLKYVEF
IQNVVYAPNSLKILFRGSEQCTMIDASTARNLELLQNVRDPKSQHTLFGAMNFTKTAAGA
RLTRANILQPPCDLETISMRLDCVAELTDNEELFYNLQSVVSRFLDVDHLLSVCVQIPKQ
ETVKTAESKITNIIYLKHTLELVEPLQAALKGCENQLFKAYYNTLADPRFGLIMEKIQTV
IHDDTRYQRGSLNMRTQKCFAVRPNINGLLDVARRTYTEIVDDIAEMIRQLGEKYNLPLR
TGYNSFRGFFIQLVHGPKDGPMPDKLPDCFIKRVKVKSSLSFTTTDLIKMNDRIRESLNE
IYLMTNVVVSELLNEVRDQIGCLYKLTETVATLDMLVSFAHACTLGNYVRPDFTDTLAVK
QGRHPILDKISMEPPVANNTYASEGSNFVIVTGPNMSGKSTYLKQIALLQIMAQAGSYVP
AEYGSFRVADQIFSRIGSDDDIETNASTFMLEMREVNYIVQNATNNSLIIIDELGRGTSN
EEGVGLCHAICEYLLSLKAFTFFATHFLELTSLDSLYPNVENYHFEVLRTFSEVGNCHKI
SYTHVLSKGHTEEKHYGLQLAEVSTLPSTVVQEAKRIAAEITQQKKLNQTCSTESRQQRA
VFRLATRLMQAARNSRLDEDSLREYLKSLKKQYETDCQPVEE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgagagccccaacagcccagcccggcacggctcgtagcttcggctccacctccagttct
caccgtaccccgggatcaagaaggaccccccacagtgccacaggagcgtccagcgccacc
ccaggggttcccctgacagctaacatcatagcacttgtggaggggcgtggcctggctagg
ggagagatcggcatggcaaccatcgacctgaagagaccagaactcatcatctcacagttc
tccgacagtcagacctacgtcaagaccatgaccaagatcaacattctccagcccattgag
atcatcatgcccaacacagcctgtgagaacggcaacatgaccaaactctttaaactcatc
agtgataacttcaacagcaccaacatctccactgtacagagaaagtacttcaatgagaca
aaaggtctgcagtatgttcgtcagctctgcgtgccagaattcaactccatagagatggag
gtggcctccaagtactattccctggcctgtactgctgccttactgaagtatgtggagttt
atccagaatgtggtgtatgctccaaactcactcaagatactcttcaggggaagtgagcag
tgcaccatgatcgacgcctccactgccaggaaccttgagctgctgcagaacgtgcgcgac
cctaagagccagcacaccctgtttggtgccatgaacttcaccaagacggctgcgggtgcc
agactaaccagggccaacatcctccagccgccctgtgacttagaaaccatcagcatgagg
ctggactgtgtggctgaactgactgacaatgaggaacttttctacaacctgcagtcagtt
gtgagccggttcctggacgtagaccacctcctgtccgtgtgtgtgcagatccccaaacag
gagacagtgaagactgcagagagtaagatcaccaacattatctacctgaaacacaccctg
gaactggtggagccactgcaggcagcactcaagggctgtgaaaaccagctcttcaaggct
tattacaataccctggcagatcccaggtttggtctgatcatggaaaagatccagaccgtg
atccacgacgacacgcggtaccagcgaggcagcctcaacatgaggacacagaagtgcttc
gctgtcaggcctaacatcaatggtttgttagatgtagccaggaggacctacactgagatt
gtggatgacattgcagagatgatccgccagcttggagagaagtacaacttgccgctccgt
acagggtacaactccttcagggggttcttcatacagctggtgcatggtcccaaggatgga
cccatgccagacaagctacccgactgcttcatcaagagagtgaaggtgaagagttccctc
agtttcaccaccacagacctgatcaagatgaatgatcgcattcgtgagtccctgaatgag
atctacctcatgaccaatgtagtagtgagtgagctcctgaatgaggtgcgagaccagatc
ggctgtctgtacaaactgaccgagacggtggccactctggacatgctggtctccttcgca
cacgcatgcacactgggaaactatgtgcgtccagatttcacggacactctggcggtgaag
cagggcagacaccccatcctggacaagatctccatggagcctcccgtagccaacaacact
tatgcctccgaggggagcaactttgtcattgtgacaggaccaaacatgagtggaaagtcg
acctacctgaagcagatagccctgcttcagatcatggcccaggctggctcatacgtcccc
gccgagtacgggtccttccgcgttgccgaccagatcttctctcgcatcggcagcgatgat
gacatcgagactaatgcctcgaccttcatgctggagatgagggaggtaaactacatcgtc
cagaatgcaaccaacaactccctcatcatcatagacgagttaggacgaggcacaagcaat
gaggagggagtggggctctgccatgccatctgtgaatacctgctcagtcttaaggctttc
accttctttgccacccacttcctggagctgaccagtctggacagcctctatcctaatgtg
gagaattaccattttgaggtcctacgcaccttcagcgaggtgggaaactgccacaagatc
tcgtacacacacgtgctgtccaaggggcacactgaggagaaacactacggtctccagcta
gccgaggtgtccaccctgcccagcactgtggtacaagaggccaagaggatcgctgcagaa
atcacccagcagaaaaagctgaaccaaacctgcagtactgaatccaggcagcagagggcg
gtgttcagactcgccacgcggctgatgcaggctgctcggaactcccgtctggacgaagac
agtctccgagagtacctgaagagtctcaagaaacagtacgagactgactgccaacctgtc
gaggagtaa
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