Branchiostoma floridae (Florida lancelet): 118413065
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Entry
118413065 CDS
T01074
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa-like isoform X1
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118413065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118413065
Spliceosome [BR:
bfo03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
118413065
Complex B
118413065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
118413065
NCBI-ProteinID:
XP_035672101
UniProt:
A0A9J7KXH5
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All DBs
Position
4:4725862..4740202
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AA seq
345 aa
AA seq
DB search
MTQYLPPNLLALFAPREPIPYLPPTDKLPCEKIRRAPYAGVTPHLQTFEDPKDTPPPTRA
ETRQERLERKRKEKLEAHANRLEEKVSEWDPANDANASGDAYKTLFVARINYDTSESKLR
REFEVYGPIRSIKMTKDVNTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
GRTVKGWRPRRLGGGLGGTRKGGPEVNVKHSGREDPTRGLGGGEDRFGGGPPGFQVDRER
GVAARWSISGSAARDRSVPRGVAAARGAGIAENAAAAGIAANGAIAVTGQSGETGPSATG
AATRARSRAAALAAGTANAAGIVTGSAVAAVGRKRSQRERKQGRS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagtaccttccgccgaatctcctggcgctttttgcgccgcgagaaccgatccca
tacctcccgcctacagacaaactcccatgcgagaagattcgacgagccccgtacgctggc
gtcactccgcatcttcagacgtttgaggacccgaaggacaccccgccacccaccagagca
gagacaagacaggaacggttggaaagaaagagaaaagagaagctagaagcccatgccaac
agactggaagagaaggtttctgaatgggacccagcaaatgatgcaaatgcatcaggagat
gcttacaagaccctgtttgttgccagaattaattatgacacatcggagtcgaagctgcgg
cgagagttcgaggtctacgggcccatcagatcgattaagatgacgaaagatgtgaacaca
gggaagcctcgtgggtacgctttcattgaatatgaacatgagcgggacatgcactcggcc
tacaagcacgcggacggtaagaagattgatggtagacgtgttcttgtggatgtggaaagg
ggaagaacggtgaaagggtggcgcccgcgtcgtcttggtggcggattgggcggaactcgc
aagggaggcccggaggtcaacgtgaagcactctggccgtgaggatcccacgcgagggctg
ggcggtggggaggaccgcttcggtggtggaccgccaggcttccaagtggatcgcgagcgt
ggagtggcggcgagatggagcatatccgggagcgcggcgagagaccggagcgtcccgaga
ggcgtcgcagccgcgagaggagccgggatcgcggagaacgccgccgcagcagggatcgca
gcgaacggggcgatcgcggtgacagggcagagcggggagaccggcccgagcgccaccgga
gccgcgacacgagcaaggagccgcgccgccgctctcgcagccgggaccgcgaacgccgcc
gggatcgtgaccggaagcgcggtggcggcggtggggaggaagagaagccagagggagagg
aagcaggggaggtcatga
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