Branchiostoma floridae (Florida lancelet): 118413272
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Entry
118413272 CDS
T01074
Name
(RefSeq) probable ATP-dependent RNA helicase vasa-like isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfo03036
]
118413272
Enzymes [BR:
bfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118413272
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118413272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
zf-CCHC
Helicase_C
zf-CCHC_3
zf-CCHC_2
ResIII
Cas3-like_C_2
CMS1
HEM4
Motif
Other DBs
NCBI-GeneID:
118413272
NCBI-ProteinID:
XP_035672418
UniProt:
A0A9J7KXP3
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All DBs
Position
4:25508605..25525281
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AA seq
810 aa
AA seq
DB search
MEDWDEGESSAPSFATSSAPSSGFGRGGGFGSGGGGGFGSGGGGGGFGSGGGFGGGGDSG
GGFGGGRGSSNGGSGCFKCGEEGHFSRECPKGGGGRGGGGGSRACFKCGEEGHMSRECPS
AGGGGGSRACFKCGEEGHMSRECPSAGGGGGSRACYKCGEEGHMARDCPSAGSGGGGGFG
AKSGGFGATNGDAKPRSGGFGRGGGFGGSSNDDDAPKGGFGRGGGFGGSSGGGGGFGGGS
GGFGGGSGGDDDGKKGGSGCFKCGEDGHFSRECPNSQGGGGGGKKGCFRCGEEGHMVADC
PNPDTRELDPDRPAPVTYVPPPPPDGEEEIFQTIAKGINFDKYDEIPVEVTGRECPCHIG
SFDEAQLYETFRANVAKAKYDRPTPVQKYSIPIVLGGRDLMACAQTGSGKTAAFLLPVLT
GMMKEGLAGSSFSNIQEPQAICVAPTRELAIQIFSEARKFSYGTMLRPCIAYGGVSVMHH
KSQIQRGCHLLVATPGRLLDFIDKGVISIKKLKYLILDEADRMLDMGFEPEIRRLVETAS
WGMPAKGERQTLMFSATFPEEIQKLAQDFLEDYIFLTIGRVGGANTDVEQTVMESSQYDK
REKLTDILGNLGQERVLVFVETKRNADFLASYLSQSGFPTTSIHGDRLQKEREEALMDFR
TGRAPVLVATSVAARGLDIPKVMVVVNYDLPSSIDEYVHRIGRTGRVGNTGKAISFYDSD
KDASLARSLVKVLADAQQNVPDWLEDAAEGAIGTNYGPAGGAFGARDTRRQYNGSGGGGG
GMQNGGGSFASGGGGGGFASSAPDEEEDWG
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggaagattgggacgaaggagagtcttctgctccaagtttcgcgacgtcttctgcgcct
tcttctgggttcggtcgtgggggtggttttggaagtggaggaggtggaggatttggctcg
ggtggaggaggtggtggattcggctctggtggaggctttgggggtggtggagacagtgga
gggggctttggcggtggaaggggtagcagcaatggaggctcagggtgcttcaaatgtgga
gaagagggccacttttccagagagtgtcctaagggtggtggtggcaggggaggtggtgga
ggaagtcgtgcctgcttcaagtgtggagaagagggccacatgtccagggaatgtcccagt
gctggagggggaggaggaagtcgtgcctgcttcaagtgtggagaggaaggccacatgtcc
agggaatgtcccagtgctggagggggaggaggaagccgtgcctgctacaagtgtggagag
gaaggccacatggctagagactgcccaagtgctggttcagggggaggaggagggtttggt
gcaaaaagtggaggatttggtgccacaaatggagatgccaagcctcgcagtggcggtttc
ggccgcgggggcggatttggtggttcaagcaacgatgacgacgctcctaaaggtggtttt
ggccgtgggggtggatttgggggcagcagcggtggtggtggtggtttcggaggtggcagt
ggaggatttggcgggggcagtggtggagacgacgatggaaagaaaggaggtagtggctgc
ttcaagtgtggcgaagatggccacttttcaagggagtgtcctaactcacaaggaggtggt
ggcggaggtaagaagggatgtttcagatgcggagaggaggggcacatggttgcggactgc
cccaaccccgacacgcgagaattggaccccgaccgccccgctccggtcacgtacgtccca
ccccctcccccagatggagaggaggagatcttccagaccatcgccaagggaatcaacttt
gacaagtatgatgagattccagtagaggtgacaggcagagagtgcccatgtcatattggg
tccttcgacgaagcccagctatacgagactttccgtgccaacgtggccaaggccaagtac
gaccgccccaccccggtgcagaagtacagcatccccatcgtcctgggcgggcgggacctg
atggcttgtgcacagactggatcaggaaaaactgctgccttcctactgccggtgctgaca
ggcatgatgaaggaggggctcgccggcagctcgttctccaacatacaggagccccaggcc
atctgtgtggcgcccacgcgtgagctggccattcagatcttctctgaggcccgcaagttc
tcgtacggcaccatgctgaggccgtgcatcgcgtacggaggggtgagcgtcatgcaccac
aagtcccagatccagcggggctgtcacctcctggtggctactccaggcaggctgctggac
ttcattgacaagggagtgatcagcataaagaagctgaagtacctgattctggacgaggct
gaccgcatgttggacatgggatttgagcccgagatccgcaggctggtggagacggcttcc
tggggcatgccagccaagggtgagagacagaccctgatgttcagcgcgaccttccctgag
gagatccagaagctggcgcaggatttcctggaggactacatcttcctgaccatcggccgt
gtgggcggggccaacactgatgtggagcagactgtcatggagtcatcccagtacgacaaa
cgggaaaaactcaccgacatcctgggcaacttaggtcaggagcgagtgttggtgtttgtg
gagaccaagaggaatgctgacttcctggccagctacctgtcccagtctgggttccccacc
accagtatccatggtgaccgactgcagaaggagagagaggaggcgctgatggacttccgt
accggccgtgccccggtgttggtggccacctcagtagctgcacgtggtctggacatcccc
aaggtgatggtggttgtaaactatgaccttcccagtagcattgacgagtacgtccatcgg
atcggcagaaccggccgtgtgggcaacaccgggaaggccatcagcttctacgactcggac
aaggatgccagcctggctcgatctctggtcaaagtgctagcagatgctcagcagaatgtg
ccagactggctggaggatgcagctgagggagccattggcaccaactatggacccgccggg
ggagcgttcggggccagggataccaggagacagtacaatggaagtggtggaggcggcggt
gggatgcagaatggtggcggcagctttgcttcaggcggtggtggcggcggctttgcctcc
tctgctcctgacgaggaggaagactggggctaa
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