Branchiostoma floridae (Florida lancelet): 118413354
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Entry
118413354 CDS
T01074
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfo03041
]
118413354
03036 Chromosome and associated proteins [BR:
bfo03036
]
118413354
Spliceosome [BR:
bfo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
118413354
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
118413354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
LSM_int_assoc
RRM_occluded
HAT_Syf1_CNRKL1_C
RRM_7
Lsm_interact
Piezo_TM25-28
Motif
Other DBs
NCBI-GeneID:
118413354
NCBI-ProteinID:
XP_035672589
UniProt:
A0A9J7MMW6
LinkDB
All DBs
Position
4:9425062..9438028
Genome browser
AA seq
942 aa
AA seq
DB search
MDFAEGEMQNPPSEDVEMGQDEDEEDSSSSDSDDETTRQLEAKVSGNPYDYSSHVELIRA
LRREGELEDVRQARERMSKFFPLTEELWLEWLTDEMKLDSGRQNRTGINQLFERAVKDYL
CADVWLEYIQYCIGGMEDGLEPVRAVCEKALTAGGLHVSKGTMLWDVYREFENAVLAGMQ
PDPGSICTGDQEEKIQAQISRINSIFRRQLSVPLLGMDGTYLEYEEFQTGPVDATVKQVY
QKACEKLDKYKPFEESLTSATAPRLQEYLAYIDYELAEDEPTRIQCIFERALQENPLVVE
LWTKYTHYLDTKLRIPHIVLSAHERATRNCPWAAILWQGYLLALERHRQPKEKIKEVMDT
ALPAGFPQASDYVSLWQTYCDYHRRRVDWTKDAESSGIDALRSTYQQAVDYCRDSLQQYF
GETGDPQCTLQRTWARLEAKYNKNMGKARELWDGIMAEGHGREAQMWLEYAELERSYGDV
ERSRKVLQKAVSKASDWPESVCEALINFEREEGTLETYDNTVARCEAQLKRVQERRAKQA
EKELVAAQAEEQKAEARKKNRAEKKSAKKQEMKQGQKRKLDNQTFVKSGDSLHTVGSSVD
EEGFKVPGLPAPKTGNFKAPEEPPVKRVKGDEPEEVPFSAAWQSIHEATIPPVPSSTGDV
PVHDPDRERRSVFVSNLSYSLHNPQDKMREVFSECGEVADVRLAFTSKKKFRGFCYVEFK
EESAAVKALGFDHKEVEGRPLFVSPCIDKRKGDKFHGFQYATKLEKNKLFVSNLPYTVTK
EALENIFKQHGPLRGVRMVTYRSGKPKGLAYVEYEDEQTASQAVLKTDGLMIGDRKIQVA
VSNPPTRRGGPHGEGVDDRLSRSDNKESQYRGKGRTQLSLLPRSLHKPTTSSASTSKPPA
GSNGTTADQPATSGQPTTTQEPVKQGAKRLTNADFAKMFFKK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggactttgcggaaggagagatgcagaaccctccgtctgaggacgtagagatggggcag
gacgaggacgaggaggacagttcttcgtctgacagtgacgatgagaccacacggcagtta
gaggcgaaggtgagcggtaacccctatgactacagcagccatgtggagctgatcagggcc
ctgaggagggagggagagctggaggacgtacgacaggccagggagaggatgagcaagttc
ttcccattaacagaagagctgtggttggaatggctgacagatgagatgaagcttgactct
ggtcgacagaaccgaacaggaataaaccagctgtttgagagggcagtgaaagactacctc
tgtgcggatgtatggttggagtatatccagtactgtatcggagggatggaggatgggctg
gagcctgtgcgagcggtgtgtgagaaggcactgactgcgggcgggttacacgtctccaag
ggaaccatgctctgggacgtgtacagggagttcgagaatgctgttcttgcaggaatgcag
ccagacccagggtccatctgtacaggagaccaggaggagaagatccaggcccagatcagc
aggatcaactctatcttcaggaggcaactgtccgtccctctcctgggtatggatggtaca
tatctggagtatgaagagttccagacaggaccggtggatgccacagtgaagcaggtgtac
cagaaggcatgcgagaagctagacaagtataaaccctttgaagagtcattgacgagtgct
acagccccacggctgcaggagtatctggcatacattgattacgagctcgctgaagatgaa
ccaaccaggatccagtgtatctttgagagagcacttcaggagaaccctctggtggtggag
ctgtggactaaatacacccactacctggacaccaagctcagaataccacacatcgtgctg
tccgcccacgagcgtgccaccagaaactgtccctgggctgctatcctctggcaaggctac
cttttggccctggagagacatagacagccaaaggagaaaataaaggaggtgatggacact
gccttgcctgctggtttccctcaagcctcagactatgttagtctgtggcagacgtactgt
gactaccaccgcaggagagtagactggacaaaagatgctgagtcctcaggtattgatgca
ctaaggtccacctatcaacaagctgtggactactgcagagacagcctgcagcaatacttt
ggtgagactggtgacccacagtgcaccttacaacgaacctgggcaagactagaggccaag
tacaacaagaatatgggaaaagcaagggaactatgggatggcatcatggcggagggccat
gggagggaggctcagatgtggctggagtatgcagagctggaaagatcctatggcgatgtt
gagcgcagcaggaaagtgctgcagaaggccgtcagtaaggccagcgactggccagagtcg
gtctgtgaggcactcatcaactttgaaagggaagaaggtacacttgaaacatacgacaac
actgttgcaagatgtgaggctcagctgaagagagtgcaggagagaagagccaagcaagca
gaaaaggagctggtggcagcccaggcagaggaacagaaagctgaagccaggaagaagaac
agggctgagaagaagtctgccaagaaacaggagatgaagcaaggacagaagagaaagttg
gataatcagacatttgtgaagtcaggagactctcttcacacagtcgggtcatcagtggat
gaggaggggttcaaagtaccgggcctgccggcgcccaagactgggaacttcaaggcacct
gaagagcctcctgtcaaaagggtcaaaggcgatgagccagaggaggtgccattttccgca
gcatggcagtccatccacgaggccacgatcccgcccgtcccctcctctacaggagatgta
ccagtccacgaccccgacagggagaggaggtcggtgtttgtcagtaacctgagctacagc
ctgcacaaccctcaggacaagatgagagaggtcttctcagagtgtggagaagtagcagat
gtgagactggccttcaccagcaagaagaagttccgtggattctgttatgtggagttcaag
gaggagtctgctgctgtgaaggctctcgggtttgaccacaaagaggtggaagggcgcccc
ctgtttgtttccccctgtatcgacaagaggaagggagacaagttccatgggtttcagtat
gcaaccaagctggagaaaaacaagttgtttgtgtccaacctgccatacaccgtgaccaag
gaggccctggaaaacatcttcaaacagcatggtccattgcgaggtgtgaggatggtgacc
tataggtcgggtaagccaaaaggactggcttatgtggagtatgaggacgagcaaacagcc
agccaggcagtactgaagacagacgggctgatgataggagacaggaagatccaagtggcc
gtcagtaacccccccacacggagagggggaccccatggggagggtgtggacgacaggcta
agtaggtccgacaacaaggagtcccagtacagagggaagggtcgcacgcagctgtctctc
cttccacggtctctccacaaacccacaacttcatcagcaagtacatccaaacctcctgca
ggcagcaatgggaccacagcagatcaaccagctacatcaggacaaccaacaactacacag
gaaccagttaaacagggtgccaagaggctcaccaatgcagactttgccaaaatgttcttc
aagaagtag
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