Branchiostoma floridae (Florida lancelet): 118413585
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Entry
118413585 CDS
T01074
Name
(RefSeq) uncharacterized protein LOC118413585
KO
K04988
polycystin 1L2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118413585
04091 Lectins [BR:
bfo04091
]
118413585
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118413585
Lectins [BR:
bfo04091
]
C-Type lectins
Others
118413585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
REJ
D8C_UMOD
GPS
Polycystin_dom
Motif
Other DBs
NCBI-GeneID:
118413585
NCBI-ProteinID:
XP_035673004
UniProt:
A0A9J7L0L1
LinkDB
All DBs
Position
4:14264452..14301609
Genome browser
AA seq
1924 aa
AA seq
DB search
MMLELCIKQGTLPKHWRWLAASAVFLSLVLSVYAQLSPCYDGSDKVCTCHKGTDTGVPCT
HCVCEHQDGDVMNLCAAISCPTSLTQPSCLNDGTAVVSACTVDAVIFEGLRPVDNRLVFQ
VKHAVTFTSLVAAECTNGNPAVTWEWMLYRLDDPDAPTQITVETTPLVTDAEDFTIPADT
VPSGVLLLELKVTVTETSGVLHTYREQSWLEAVEAALIAHIAGGTRRTVYFDDYTVDAWY
SWDPEGNIGILDFSYDWTYEILQYPTPATTDACTSYTSLTDNWRDIANLWDSANEHCDGN
EVTSEGVFTWTAGWYRFEGAAGNHLADAPPGIDYTCGTRAGVWMDGPQPATSEGAVCRTA
CAQWAGDTCAFTWGILAMACPGFYVYYLRPVIFCHLGYCTVSRPINIEPTPAQPNTVDDY
ICNWNDGPAGIPHLYGAEGAIIKHTVEISYPGRLPGTHSVITVLGPLGSDLFVFCRGNCD
HGRVVAWYNFKLEVVTTMVGDIVWTVPVAPAGFAGINWATNTTDGTDTGPTVEVLPFTFT
KTGAYTMRATLFVGGVATTNYIEYSAYVVTFTKPNDNPCRIVPALPLVLADACVYCDEFV
YDYHPLTFEFLWWADGIAMAAVAFPTTPVFTTPPYVGFYTGWARYSQITLLPSGVVNFRI
KVSCVELQQLEVDFSITIAPPTDPTDVWVPPLLDGPESTFSKNLGKGDRVGAAALATSIA
AVAVNLGKGNDGQGGGVGPRLKDKSKKLVEKVITKVGDIDTSNEFDVQLATLRALAVATS
VGDLLTPVAMVSAANKTHFVLKDLRDRVAAGIPTSLTADEVNAACGAAFTAIAGTLKPAA
EAAREDHKNGLVYSAVLLANQRVATSNFRAIDVMDDIYLNYMMTAPDITGPPWPPAIIVI
QDLGLRIQREECGDATNRAYQTGEFSPIILGVPSSADLTDSCDGSAVSGMSIVHAEFNPF
EYSNNSHMVRGTVVGLASKIGNATNHVTGLGPPLDIIIRRRLIEESSNVMFSWHITNAYI
GNVTVVPFLVRYNGSSLHINIRHNYTNPRPVVHLFLRKDDPPTPEVYNWTVSLPTPQADL
FTIPAGNDTVSASPYSWLVEPPEIDITEDDVVSKTYYFLGIQFEDGEDAATHLNFSVDVM
ETLCVYFGDEWENEDDHLWHEQGCKPGALSNSTHMHCRCNHLTKFTGIVAPNPINFSEVF
TKDILQNPIGLILVLSTFLLYLLLVLWARRKDRRDLTKVGVAPPQGHILNPDPWCQYVVT
LYTGFKGGSGTTATVWINLFGDYGRTGPIALQDENRPLFEEGSVDSFLVSSRNIIGMIHV
IHVWHDNTGYSPEWFLGQVVLQEKATGSVVYFLCNRWLAVGEDDGKIERLLPVSSPEELA
EFGNLVKAKVERDMNDGHLWFSVKGRPARSPFSRVQRLSCCLTLLYSTMVTNIMFFGQGD
NYESPEKITIGGTEIDVPIDLPKLMISLQSAAIIIPVNLLIVFFFKNARTKPVKVVDTRQ
PLSAVLVQQLRPSSTKGRPWEPAWITSPSDGTLDGSDHDDTTCTSNAPGKPKSSSNKNKT
NSISNDREKSVLESLSTSYRTKEPMLNYSLGLERTYAFRPRNHGLLTTARQVVASKFSSE
NSATSDSSSEHSQPNPKEITDPKETFDHTKDNSSKEITDPKENFYHKKDNSSKEEADAKK
EKGFLPWWTLYIGWLLVWSASFVAAFFTVLYTLSFGRLKAEAWCIAFVTSFLSDLILVQP
VKLVVVAVVFAIFIKSPVIDENPEPRPLEGDEEYIQYKRKLQQPKVMLPLNTADLAGDRS
RKLDDKKRRSAVREVCTFIIFALVVMMNVYNEIDPLAFYMNESVKNSLLYETEEITFDEV
ADIESFWVWLQSGVLPTLYYSTWYNNMADQEWAIMGNKNSWLVGSPTLRQVRLDSGKSSR
RLLK
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgatgctggaactctgcatcaaacagggcactctaccaaaacattggagatggctggct
gcttcagccgtgttcttgagccttgtcctcagtgtttatgctcaactgtcaccctgctat
gatggttctgacaaggtgtgtacgtgccacaaggggacagacacaggcgtgccctgtact
cactgtgtgtgtgagcaccaggacggagatgtgatgaacctctgtgcagctatcagctgc
ccaacatcccttacccagccatcgtgcctgaatgatggcacagcagttgtcagcgcttgc
acagtggatgctgtgatttttgaggggctaaggccagtggacaaccggttggtgtttcag
gtgaagcatgcagtcacattcacaagtcttgtggcagctgaatgcaccaatggaaaccca
gccgtaacatgggaatggatgctgtacaggttggatgaccctgacgctcccacccagatt
actgttgagaccactcctctggtgacagatgccgaggacttcaccatccctgctgacaca
gtccccagtggtgtcctccttctggagctcaaggtgacagtcacggagacatcaggagtt
ctgcacacttacagggagcagtcctggctggaagcggtggaggcagccctgatcgctcac
attgccggggggaccagacgtactgtgtactttgacgactacacagtagatgcctggtac
tcctgggaccctgagggcaatataggcattctggacttcagctatgactggacatatgaa
attctgcagtatccaacacctgcaacgacagatgcttgcaccagttacacttccctgacc
gataactggcgagacattgccaatctctgggactcagctaatgagcactgtgatggaaat
gaagtcacttctgaaggtgttttcacatggacagccgggtggtatcgttttgaaggggct
gcaggtaatcacctggctgatgctcctccaggaattgactacacgtgcggcactcgtgca
ggagtgtggatggatggcccccagcctgcaacgtctgagggcgcagtatgcagaacagcg
tgtgctcaatgggcgggtgacacctgtgcatttacctgggggatactggccatggcttgt
cctgggttctatgtctactaccttcgtccagtaatcttctgccatctgggctactgcaca
gtgtcaaggccaatcaacatcgaacctaccccagcacagcccaacacagtagatgactac
atatgcaattggaatgatggacctgctggcattcctcacctctacggagcggagggagcc
atcatcaagcacacagtggagatctcctacccaggtcgcctgcccggaacacactctgtc
atcactgtgctcggcccgctaggaagcgacttgtttgttttctgtcgtggaaactgtgac
catgggagagtagtggcatggtacaacttcaagctggaggttgtgaccaccatggtggga
gacatcgtctggacagttccagtagcacctgctgggtttgctggtattaactgggctaca
aacacgacagacggaacagacactggacccactgtggaagtactccccttcacatttaca
aaaactggagcctacacaatgcgtgcaacactttttgttgggggtgtggcaaccacaaac
tacatagagtacagtgcttacgttgtcacattcaccaagcccaatgacaacccctgtcgg
attgtaccagctctgcctcttgtcttggctgatgcctgtgtctactgtgatgaatttgtg
tatgactaccacccactgaccttcgagttcctgtggtgggcagatggaatcgccatggct
gcagtagccttcccaacaacacctgtcttcacaactcctccttatgtaggcttttacact
ggatgggctcgctacagccaaataactctcctgccttctggcgtggtaaacttcaggatc
aaggtctcatgtgtggagttgcagcaattagaggtggacttttctataaccattgcccca
cctactgatcctactgatgtgtgggtgcctccacttctggatggaccagagagcactttc
agtaagaacctgggtaaaggagacagagtgggagcagctgccctggcaacaagcattgct
gcagttgcagtgaaccttggcaagggaaatgatggtcaagggggaggagtagggccgaga
ctaaaggacaagtcgaagaagctggtagaaaaagtgatcaccaaagtgggcgacattgac
acctcaaatgagttcgatgtccaactggcaacattgagggccctagcagtggcaacatct
gtgggtgatctactgacacctgtagcaatggtctctgcagccaataagacccattttgtg
ttgaaagacctgcgcgaccgtgtggctgctgggatacccacatcccttactgcagatgaa
gttaatgcggcatgtggggcagcctttactgccatagctggtactttaaaaccagctgca
gaagctgcaagggaagaccacaagaatgggcttgtttattcagctgttcttcttgcaaac
caacgtgtagcaacatcaaatttccgggccattgacgtcatggacgacatctacctgaac
tacatgatgactgctcctgacattactggccctccctggccgcctgctataattgtcatc
caagaccttggcctccgtatccagagggaggaatgtggggatgccaccaatagggcatat
cagactggagagttcagccccatcatcctcggtgtaccaagttcagcagaccttacagac
agttgtgatgggtcggctgtgtctggtatgagtattgtacatgcagagttcaatccattt
gagtactccaacaactcccacatggtgcgtggtactgtggtgggtctggcctccaagatt
ggcaatgctacaaaccatgtgactggacttggaccaccccttgacatcatcattcgccgg
cgactgattgaagagtcatcaaatgtgatgttttcatggcatataactaatgcctacatt
ggcaatgtaacggtagtgccttttcttgttcggtacaatggcagctctcttcacatcaac
atcagacacaactacaccaatccccgaccagttgtccacctcttccttcggaaggacgac
ccacccacccccgaggtgtacaactggaccgtcagcctgccgactccccaggcagacctg
ttcaccatccctgcaggaaatgacacggtatcagccagtccctatagctggcttgtggag
ccgccagagattgacataacagaagatgatgtggtcagcaagacctattacttcctagga
atccagtttgaggatggagaagatgctgccacacaccttaacttctctgtggatgtgatg
gagaccctgtgtgtgtactttggtgatgagtgggagaatgaggatgaccatttatggcat
gagcaaggttgcaagcccggagcgttatccaactctactcacatgcactgccgatgtaac
cacctcaccaagttcaccggcatagtcgctcccaatcccatcaactttagtgaggttttt
actaaagacattcttcagaacccaattggactgatcctagtcttgtcaactttcctgctc
tacctcctgttagttttgtgggcgagacgaaaggatagacgggatcttactaaggtcgga
gttgctccaccacaaggtcacatcctgaaccctgacccctggtgtcaatatgtggtcacc
ctctacacgggatttaaaggtggatcaggaacaacagctacagtgtggattaacctgttc
ggagactatggacggactggaccaatagcgttgcaagatgagaatcgtccactttttgaa
gaaggaagcgttgactccttcctggtgtcatcacgtaacatcatcgggatgattcatgtc
atccatgtttggcacgacaatacgggctacagcccagaatggtttctgggccaggttgta
cttcaagaaaaagctacagggagtgtggtctacttcctgtgtaacagatggttagcagtt
ggagaggatgatgggaagatagaacgcctccttcctgtcagcagcccagaagaattggca
gagtttggcaaccttgtcaaggcaaaggttgaaagggacatgaatgatggccatctgtgg
ttctctgtgaaaggacgccccgcccgaagccccttcagccgtgtccagcgcctgtcctgc
tgcctgacactcctgtacagcaccatggtcaccaacatcatgttcttcggacaaggagac
aactatgaatcgccagaaaagatcacgattgggggaacagagattgatgtaccaatcgat
ctccccaagctgatgatcagtttgcagagtgcagcaatcatcataccggtcaatcttctt
atcgtcttcttctttaagaatgctcggacaaaaccagtaaaagtggtggacaccaggcag
cctctttctgcagtgttggtgcaacaactcaggccatcatccactaaagggcggccttgg
gagccagcgtggataaccagtccctctgacggtactttggatggtagtgaccatgatgac
actacatgtacatctaatgctccgggcaagcccaagagttcttccaacaagaacaaaact
aacagcatctccaatgaccgggaaaaatcagtccttgagtctctctccaccagttacaga
accaaagagcccatgctgaattactctctagggcttgaaagaacatatgcatttaggcca
agaaaccatggtttgctgacaactgcgaggcaagttgttgcctcaaaattttcttcggaa
aatagcgcaaccagtgacagctctagtgaacattctcaaccaaatcccaaggaaatcact
gatccaaaagaaacctttgatcacacgaaagacaacagttccaaggaaatcactgatcca
aaagaaaacttttatcacaagaaagacaacagttccaaagaagaagctgatgccaaaaag
gagaagggtttcttgccatggtggacactatatattggctggctcctggtgtggtcagct
agttttgttgcggccttcttcaccgtcctgtacacactgtcatttgggaggctgaaagca
gaggcctggtgcatcgcctttgtcacatccttcctgtcggacctcatcctggttcaacct
gtcaaactagttgtcgtggcagtggtctttgctatttttataaagtcccccgtaatagat
gaaaaccctgaacccagaccgcttgagggagatgaggaatatatacagtacaagagaaag
ctgcagcagccaaaggtgatgttgcctctgaatacagctgacctggctggggacagatcc
aggaaactggatgacaagaaacgacgtagtgcagtaagagaggtttgcaccttcatcatc
tttgcgttggtggtgatgatgaatgtctacaatgaaatcgacccactcgccttctacatg
aatgaatcagtcaaaaactcactactttatgagactgaagaaataacttttgatgaggta
gcagacatagagtccttctgggtatggctacagtctggtgtcctcccaacactgtactac
agcacatggtacaacaacatggctgaccaggagtgggccatcatgggtaacaagaactct
tggctcgtggggtcgccaacattacggcaagtcagactcgactctggtaagtccagcaga
cgtctcctgaaatga
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