Branchiostoma floridae (Florida lancelet): 118413683
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Entry
118413683 CDS
T01074
Name
(RefSeq) uncharacterized protein LOC118413683
KO
K04988
polycystin 1L2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118413683
04091 Lectins [BR:
bfo04091
]
118413683
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118413683
Lectins [BR:
bfo04091
]
C-Type lectins
Others
118413683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAM
REJ
PLAT
GPS
EGF
TSP_1
hEGF
Motif
Other DBs
NCBI-GeneID:
118413683
NCBI-ProteinID:
XP_035673104
UniProt:
A0A9J7KZ03
LinkDB
All DBs
Position
4:25603433..25629180
Genome browser
AA seq
1516 aa
AA seq
DB search
MAVQLTVAVSGADELCPVPRGNCSCETVETQGQYCPLCTCKPDVTDVMCLLNVDGGWSAW
NTWSDSSCNCGVGYRTRSRTCDNPLPINNGTLCEGPLWDIQPCCRGTFDCDFETDMCGWT
QNSQLQDNFDWTRHRGSTGSVDTGPSFDHTMGTNINGHYVYIETSSAGAGDKALLSSPTV
TTDCTKYLRFWYHMYGSAIETLNVYVRTGSSLPTVPIFTRTGERGNQWLRAEVEISITGS
YHVVIEGIRGSGITGDIALDDITLQATGTCTTGCCRNNPCQNYGTCVEDAATATGYTCLC
LDGWEGENCTQDVDECQSSPCGPGTCHDRLNGYLCQCPWGYEGIHCEEAGDLLVECSKVE
VCEHTIQVEIPSGSCRVYANIVEGNWKYDVPIRPIYSKNNAFRGDVDLTSCPGGTITGYQ
WYVFEEVLIGGATVYNVLNLNIRADEVELVLPSQSLWPQKYMIQFQVTVQNHTTDHMKVY
AVARTWIEMFASPLVVTLGPALVTRYAHGDLWVSAEGSWDPEGLADPSEWSYLWTCNWTH
GGAVEDCAAQETERPEVQLGRDNSLPEKTTYSITVVASYPGRGGVTASQTVILHDCSACQ
LSIKCVRNCDQTGLDQTAPLLLKAVPGTNTTAMYQWSVVGSPGAFTGLPTTVDVTRETLN
VEANVFEAGEEYSVTLVNHIQQCSDESAVSTWVFRVRPGVRLGNDSITCDIHRDGSGGCV
CCEEVFDELGPVTYKFLIIAPYDKDRGQVQFPDNSTFLETTLPLTPYETMIPRYCPDVLP
QVPIIVQVWVSAIDGRLLVEKNITGSLSEEEEAPPAEVIETLARTELRDMGTIQNVATLI
TLGSAKNLDLGSKATAAKTLQATAEALRAITESGSDVSVADINLVTSTIFTGMTHMLEDS
SNTSSNVKDTEEVKQIASAAYNTMDATADVYLSLMTEEGATAILHMPNLHFKAQKGGCQE
EQRKILVVQDLVVVTPSFRDLSSECGEDNTVGLVLTEANFNTLKYAGNSREIRSEVVSMA
VRVGGEIKPVDHLPDPIDMIIRRDEQDMASTMFTHVGRIVSDSDFAVATFRPQKSGTALS
IYLDVEQTPEPRDIRLVLQNELSDSISEIDYDKISLTTVLPVPQHELFTLPWMYNGTEGN
LTASPYSWLILPEKGPINVNQNATNTTYFLHILHDTKNDISRAKVTSKFTVSILETACVY
FGEESQQWLSDGCKVGPLSNTTHIHCQCDHLTKFSGFVPPNPLNFDQVFSASIAENQVGL
IAVLAVLGLFVMGCLLARKADRADLQKVGVTIPTGLRLNSNIDNQYIITIYTGYRAGAGT
TAQVSIALFGFMDESEPIHLCDNRRVLFESGSEDSFLVSTESRLGMLTHVHVWHNNAGFS
PGWFLSRVVVKHVRSGHQDYFLCNRWLALEEDDGRINRMIFVATPEEMASLSNLIMSKMS
KDAHDGHLYYSMVGRPARSSFSRVQRLTCCMCTVYCTMVTNIMFFGQGDKFDPPEPIRFM
GVEFELPISLPEVHIG
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccagctcaccgttgccgtctcgggcgcagacgagctgtgtcctgtccccagg
ggaaactgttcatgtgaaactgtggaaacgcaaggccaatactgtccactctgcacctgc
aagccggatgttacggacgtaatgtgtttattgaatgttgatggcggctggtcggcatgg
aacacctggagcgactccagctgcaactgtggtgtggggtaccggaccagatctcgcacc
tgcgacaaccccctgcccattaacaacgggacgctgtgtgaggggcctctatgggacata
caaccatgctgcaggggcacctttgactgtgactttgagactgacatgtgtggctggact
cagaattctcaacttcaagataactttgactggacacgacatcggggatccacaggttct
gtcgacacaggaccatcttttgaccacacaatggggacgaacataaatggccactatgtg
tacattgagacatcctcagcaggcgctggtgacaaggcactactgtccagtcctacagtc
accaccgactgtacaaagtacctgcgcttctggtaccacatgtatggcagcgccatcgag
acgttgaacgtgtatgtaaggacagggtcttctcttccaacagtccctatcttcactagg
acaggcgagcggggcaaccagtggctccgtgctgaagtagaaatcagcatcaccggcagt
taccatgtggtcatagagggaatcagagggtcaggcatcactggggacattgcgctggat
gacatcacactccaggcaactggtacttgcacaacaggttgttgccgcaataacccgtgt
caaaactacgggacttgtgtcgaagatgcagcaactgcaacaggatacacatgcctctgt
ttggacggatgggagggggaaaactgtacccaggatgtagatgagtgtcagagcagtccc
tgtggccctggtacctgccatgaccggctcaacggttacctctgtcagtgtccatggggc
tacgaaggaatccactgcgaagaagcaggagatttgctagtggagtgttcgaaagttgaa
gtttgcgagcacaccatacaagtcgagattccttcaggcagctgtagggtgtatgccaat
atcgtggaaggaaattggaagtatgatgtacccattcggcccatctacagcaaaaataac
gccttccgtggtgacgtggatctgacgagttgccccggtggtaccatcactgggtaccag
tggtacgtttttgaggaagtactgattggtggagccactgtgtacaacgtactcaatttg
aacatcagggctgatgaagtggagttggtgctacccagccagtcactgtggcctcagaag
tacatgattcagtttcaggtcactgtacaaaaccacacaactgatcacatgaaggtatat
gctgtggcacgaacatggatcgaaatgttcgcatcgccgttggtggtaacgcttggacca
gcgctcgtcacccgttacgctcacggtgacctttgggtgagcgctgaaggttcttgggat
cctgaaggtttagccgacccatccgagtggagctacctttggacatgtaattggactcat
ggtggagctgttgaagactgtgctgcacaagagacagagagaccagaagtacagctaggc
agggacaacagtctgccagagaagacaacatacagcatcacagtcgtagcctcctatcca
ggaaggggtggagtcacagcgtctcagacagtgatcctccatgactgctcagcttgtcaa
ttatccatcaagtgtgtcaggaactgtgaccagactgggctggaccagacggcccctctc
ctactcaaggctgtccctggaacaaacactaccgccatgtaccagtggtcagttgtgggg
tccccaggtgcctttacaggcctgccaaccacagtagatgtgacaagggaaacacttaat
gtggaagcgaacgtgtttgaagctggagaagagtacagcgttaccttagtcaaccacatt
caacagtgcagcgatgagagcgctgtatcaacatgggtgttccgagtgagaccaggtgtc
cgcctcggtaacgacagcatcacatgtgatatacaccgtgacggctcaggtggatgcgtc
tgttgcgaagaagtctttgatgaacttggcccagtgacctacaaatttctcatcattgcg
ccatacgataaagacagaggccaagtacagtttccagataacagcacctttttggagact
acattgccactaacaccttatgaaacaatgattccaaggtactgtccagacgtcctgcca
caagttcccatcatcgtgcaagtttgggtctcagcaatcgatggacgactactggtagag
aagaacataacaggaagtttgtctgaagaagaagaagcacctcctgccgaagttatcgag
acactagccagaactgagctgagagatatgggtaccatccaaaacgtagcgacactcatc
actctgggttctgccaaaaatctggatttaggatctaaggctactgccgcaaagacgctt
caggcaacggcagaggcattgagggccataacagaatctggttcagatgtgtcagtggca
gacattaaccttgtcacatctaccatatttacaggaatgacccatatgttggaagactca
tcgaatacgtcctcaaatgtcaaagatactgaagaggtgaagcaaattgctagcgctgcg
tacaacacaatggatgccacagcggacgtgtatctctcccttatgaccgaggagggagct
acagcaattcttcacatgccaaaccttcacttcaaagcacagaaaggaggatgccaagaa
gagcaaaggaagatacttgtggtgcaagatttggtggtggtaactccatcattccgtgac
ctgtcttctgagtgcggtgaagacaataccgtaggtcttgtgttgacggaagccaacttc
aacactttaaaatacgcgggcaactcacgggagatccgatccgaggttgtgagtatggcg
gtccgtgttgggggagagatcaaaccggtcgaccatctccccgaccccattgacatgatc
atccgccgggatgagcaggacatggccagcaccatgttcactcatgtcggcaggattgta
tccgatagtgactttgctgttgcaacgttccgtccacagaagtccggaactgctctcagc
atctacctggacgttgagcaaaccccagaacctcgagatattcgcctggttctgcaaaat
gaattatcagactcaatttcagaaattgactatgacaaaatcagcttgacaaccgttctg
cctgtgccacagcacgagttgttcacactaccgtggatgtacaatggcacagagggcaac
ctaacggccagtccctactcctggctgatactccctgaaaagggaccaataaatgtcaac
cagaacgcaaccaacactacctactttttacacatacttcatgataccaagaatgacatc
tccagagccaaggtgacgagtaagtttacagtcagcatactggaaactgcttgcgtgtac
tttggagaagagtcacagcagtggctgagcgatggatgcaaggtgggtccactgtcgaat
accacccacatccactgccaatgtgaccacctgaccaagttttcgggatttgttcccccg
aacccactgaactttgaccaagtattcagcgccagtattgctgaaaaccaagttggtctc
atcgccgttctggctgtacttggactgtttgtgatgggctgcctgttggcgaggaaggca
gacagggcagatctgcagaaggtcggtgtgaccataccaaccggtcttcggctgaactcc
aacattgacaaccagtacatcataacaatctacacagggtacagggcaggtgctgggacc
actgcacaggtttccattgccctgttcgggtttatggatgagagcgagcccatccacctg
tgtgacaacaggcgggtgctgtttgagagcggcagcgaggactccttcctggtgtccacg
gagagccgcctcggcatgctcacacacgtccacgtctggcacaacaatgctggcttcagc
cctggatggtttcttagcagggtcgtggtgaaacatgtacgttctggtcaccaggactac
ttcctctgcaacaggtggctagctctagaagaggatgacggcagaatcaaccgtatgatt
tttgttgcgaccccggaagagatggccagcctatcaaacctgatcatgagcaagatgtca
aaagacgcccatgatggccacctttactactccatggtcggccgtcccgcccgcagcagc
ttcagccgtgtgcagcgcctgacgtgctgcatgtgcacggtatactgcaccatggtcacc
aacatcatgttctttggacagggagacaagtttgacccaccagaacccatcaggttcatg
ggtgtggagtttgaactcccaatcagcttacctgaggtacatataggctaa
DBGET
integrated database retrieval system
