KEGG   Branchiostoma floridae (Florida lancelet): 118413804
Entry
118413804         CDS       T01074                                 
Name
(RefSeq) helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bfo03400]
    118413804
Enzymes [BR:bfo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     118413804
DNA repair and recombination proteins [BR:bfo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    118413804
SSDB
Motif
Pfam: POLQ_helical DEAD HTH_61 Helicase_C ResIII HHH_5 DUF7898 DNA_pol_lambd_f DUF4332 Cdd1
Other DBs
NCBI-GeneID: 118413804
NCBI-ProteinID: XP_035673236
UniProt: A0A9J7MN19
LinkDB
Position
4
AA seq 1267 aa
MDTEACNIKRRVNSSRKRRRDPTGTTPAKGKIARQISFTEGPSSQVQSSDTALKQKTSKA
MYCEGTCQSNPVSNNEETPRNKRLVTNTSAVSCGQPSRRPLFKGNASEEMKGKQMYQDMP
NSWKVVSRQEEVSSGRPGLRSGSVSAREVKRPEDMSKRKRPLPCASSTPGPDKSFQECPG
TPDMLFQDEDCNTADPQDSFNSSDTLFAQMNLSNLQESESANQVKEFTPAADDVVLAPIA
MESSQNDDRSENTHVQEKKILTDGLSRTSGKVKEANDPKQEPKLSGIQSGNIGNLNPSCK
TMPLSGKVFHTRGQRQQLGNTTIQSHCAQSSSYGKKESDTKYTKPPQDKVREEANTVPTK
PMVLKQETGKDSCLGDDIKKQQTVAIKSAVSTPKPSGSLRDRIRQALQTNIKNTTPQATK
SKQMREESVTKVISDAMETYQKTSEYDVGPFYGLPSRVREMLIQHRGIGKLYDWQNECLT
LDTIQNRGNLIYSLPTSGGKTLVAEILIMKEILCRKKDTLLVLPFVSIVQEKVRTIAPFA
ADLDFIVEEYAGSRGRFPPRKRRNKHALYIATIEKANSLVNSLVELGRLEEIGLVVVDEL
HMLGEGGSRGATLEMCLAKVLYISKSSQIIGMSATLNNIQELQTFLSAEVYSNNFRPVQL
KEYLKITDSIYEVNSKALCPEDQIQFSRMVSYKYPKEMQSRDPDHLVGMVMDVIPTHSCL
LFCPTKKNCQNVVDMLCKLLPRTLRGHKVPGKKALLKALESDGNGTVCPVLKYTIPFGLA
YHHSGLTMDERKLIEEAYSEGVLCLLACTSTLAAGVNLPAKRVILRAPFVGEHFISRAQY
KQMVGRAGRAGIDSSGESVTIVKPQDKAKIIELIGRPFESCRSSLMYDDGKGLRTLILNL
IGLKIATSRAAVSAFLSHTLFSVQCDSQQDQGFLEFTQHALQDLVEVGLVTEKTLLPADS
GDEDILLEVTRLGQASFKGPIDIKYCTQLYQDLCKAQEALVVENSLHMLYLVTPYDMVGS
VRPNWMIYFRQLSQLKPIELKAATIIGVPEGYITRKASGQRARQASIDEAVVSRFYLTLM
IYSLMKQHSIWDVSEKFEVPRGFLQNLLSSAASFCACVLHFCEALEEMWPLRVLLETLVK
NLSYCVTSELIPLMEVPGVKQGRARQLYKAGYKTLQDLAHAETESLVQNIQHMPRKVAYQ
IIAAAKVLISEKAESLLEEAEDLVAMPTDGVAGSVAVETDAMSVDGWSQDSQNQRWSQVS
LKETPSQ
NT seq 3804 nt   +upstreamnt  +downstreamnt
atggatacagaagcctgcaatatcaagcgccgtgtcaactcttcccgtaagcgccgccgt
gaccccacagggaccacgcccgcaaagggaaagatagccagacaaatcagttttacagaa
ggcccatccagtcaggtacaatcttcagacactgctttaaaacagaaaacttctaaagca
atgtattgtgagggaacctgccagtcaaatccagtcagtaacaatgaagaaacacccagg
aataaaagacttgtgacaaatactagtgcagtatcttgtggccagccatcaagaagacca
ttgtttaaagggaatgccagtgaagaaatgaaagggaagcagatgtaccaggatatgcca
aactcctggaaggttgtctcaaggcaagaggaggtatcatctggaaggccaggactgagg
tcagggtcagtgtcagcaagagaagtgaaaagaccagaagatatgtcaaagaggaaaagg
cctcttccttgtgcaagttctacaccaggacctgataagtcctttcaggagtgtcctgga
acacctgatatgctgttccaagatgaagactgtaacactgcagaccctcaggatagtttt
aactctagcgacacactctttgcacagatgaacctcagcaatctacaggaatcagaatca
gccaatcaggtaaaagaattcacacctgcagcagatgatgtcgtccttgctcctatagct
atggaatcatctcaaaatgatgacagaagtgaaaacacacacgtgcaagaaaagaagata
ttgactgatggactcagtaggactagtggtaaagttaaagaagcaaatgaccccaaacaa
gaaccaaaactcagtggaatacaaagtggaaatatagggaacctcaacccatcttgcaag
acaatgccactttctggaaaagtatttcataccagaggacagagacaacagttgggcaat
acaactatccaaagccattgtgcacaatcttcatcatatgggaagaaagaaagtgataca
aaatacactaagccaccacaagacaaagttagggaggaggcaaatactgtacccacaaaa
ccaatggttttgaaacaggaaactggcaaagacagctgtctgggtgatgacataaaaaag
caacagactgtggcaatcaagtctgcagtgtccactcccaaaccatcagggtcattaagg
gatagaattagacaggcactgcaaaccaacatcaagaacaccacacctcaggctaccaag
agcaaacagatgagggaggagtcggttaccaaggtgatcagtgatgctatggaaacgtac
cagaagacttcagagtacgatgtcggtccattctatgggctgccttccagagtgagggag
atgctcatccaacatcgagggattgggaagctctatgactggcagaatgagtgtctgacc
ctagataccatccagaaccggggaaacctgatctactccctcccgaccagcggggggaaa
accttggtggcagagatcctcatcatgaaggagatcctctgtaggaagaaggacacactg
ctggttcttccctttgtttctattgtacaagaaaaggttcgcacaattgctccctttgcc
gctgatctggacttcattgtggaagagtatgccgggagtcgaggaaggttccctcccaga
aagaggcggaataaacatgccctttacatcgctaccatcgagaaggccaactccttagtc
aactcacttgtggagctaggaagacttgaagagataggccttgtcgttgtggatgagctc
cacatgcttggggaggggggcagtagaggtgccactctggagatgtgcctggcaaaggtg
ctctacatcagcaaatcttcgcaaatcattggcatgagcgccacactgaacaacatccaa
gaactgcagacgttcctctctgctgaggtgtactccaacaacttcagacctgtgcagctt
aaagaatatctgaagattacagacagtatttatgaggtgaactcaaaggccttatgtcct
gaagaccagattcagttctcaagaatggtcagctataagtacccaaaagagatgcagtcc
cgagacccagaccacctggtcggcatggtgatggacgtgatccccacccactcctgtctg
ctcttctgccccaccaagaagaactgtcagaatgtggtggacatgctgtgtaagctactg
ccaagaactctccgtggacacaaagtacccgggaagaaggcccttctgaaggccctggag
tctgatggcaatggtacggtgtgccctgtgctgaagtacaccatcccgtttggactggcg
taccaccacagcgggctgaccatggacgagaggaaactgatcgaggaggcgtactcggaa
ggagtgctgtgtctactggcctgcacctccacactcgctgcaggggtcaacctgccggca
aaaagggtgatcctgagagcgccctttgttggggaacacttcatcagcagagcccagtat
aaacagatggtggggcgggcgggcagggcaggcattgactcctcgggggagagtgtcacc
atagtcaagcctcaggacaaggcaaagattattgagctgattgggagaccatttgagagt
tgccgcagcagtctgatgtatgatgatggcaaagggctgagaacacttatcttaaatctc
attggtctgaagattgccaccagcagagcagcagtgtcagcctttctgagccacaccctc
ttcagtgtgcagtgtgattctcagcaggaccagggtttcctggagttcacccagcatgcc
ttgcaggacttggtagaagtggggctagttacagagaagacattactaccagcagacagt
ggagatgaggacatcctgctggaagtgaccagactgggacaagcttctttcaaaggtccc
atagacatcaagtactgtacccagctgtaccaggacctgtgtaaggctcaggaggccctg
gtggtggagaacagcctgcacatgttatacctggtcacaccttacgacatggtggggagt
gtgcgcccaaactggatgatatacttcagacagctcagccagctgaaacccattgagctg
aaggctgcaacaatcatcggtgttccggagggctacatcaccaggaaggcgtccggacag
agagccagacaggcctccatagacgaggcggtggtgagccggttctacctgacactgatg
atctacagtctgatgaagcagcacagcatctgggacgtctccgagaagtttgaggtacca
aggggctttctgcaaaacctgctgtccagtgcagccagcttctgtgcctgtgtgctgcac
ttttgtgaggcactggaggagatgtggccattaagggttctactagaaacccttgtgaag
aacctgtcctactgtgtcaccagtgaactcatcccactcatggaggtgcctggtgtcaaa
cagggtcgagcaagacagctgtataaggctgggtacaagaccttacaggacctggctcat
gccgagacagagagtctggtccagaacattcagcacatgccgaggaaggtggcctaccag
atcatcgctgctgcaaaggttctgatttctgaaaaagctgaaagcctactggaggaggca
gaggaccttgttgccatgccaacagatggagttgctggttctgttgcggtggaaacagat
gccatgtcagtggacggttggagccaggacagtcagaaccagcggtggtcacaagtttcc
ctaaaggagactccatcacagtag

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