KEGG   Branchiostoma floridae (Florida lancelet): 118413847
Entry
118413847         CDS       T01074                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bfo03036]
    118413847
   03400 DNA repair and recombination proteins [BR:bfo03400]
    118413847
Chromosome and associated proteins [BR:bfo03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    118413847
DNA repair and recombination proteins [BR:bfo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     118413847
SSDB
Motif
Pfam: MMS19_C MMS19_N HEAT_EZ HEAT_ECM29 NopRA1 HEAT_EF3_N HEAT PP4R3 Sec7-like_HUS
Other DBs
NCBI-GeneID: 118413847
NCBI-ProteinID: XP_035673307
UniProt: C3ZS73
LinkDB
Position
4:complement(27214118..27227398)
AA seq 1026 aa
MAALSGNVQENVLEFVQGQQDSALQSVAKAVFDGETSLLQLVESLGSSLTSTEVTTRARA
TQLLAEVLHRSPSNRLTEKEAEVLSAFFCDRLLDHHSVQPHVLHGLLALSAAPQLPQGEE
VKIVQVIFKEVYVQSLVQTDRRAIYNILANFLDTRLEALQALGADFVWGFIQAMDGEKDP
RNLIIAFSIARIVAQAFPIGTFTEELFEVISCYFPIDFTPPADDPHGVTREDLVLGLRQV
LAATSKFAQFCVPMLLEKLSSDVTSAKLDSLHTLAACAEVYGADSMKSFLDLLLSAISKE
VYSSIHQDVENAALAGLTAVVATLSHAVTETRSVFSLHHFLDSLLKGCKHHLCEPELKLM
WPSAKLLQAAARASDPACVHVLDTAVPLLVEQFQVHPYPQHRHTILEVTIAFIHVAHAST
SGTDAPNPVVPHSDNFLTLFYSVLEDADAGLRSSGVGGMAAMIGITDVVKGKHLDLCANH
LGRLVLHDADPTVQRRSTEALAAMATAHPDVVREEVLSKLLQVLENNNPNAMDTNQSEQV
CAKHVTNQYVLNTLAAVSTHPTIVRCTIPKLLSHLQALIESCPDQATQEAIATLDCVYKV
VEKTVINDANVEYFVDTIVLNLMSMALSAAVNTSDENLLHDTSLLEIVAKVLRAVARSLP
NSTGKGIVNSTVQAFLQGNLAAISLNTSASFEPLDVSSPWQQTQTVQLLSAIVCSVARNV
DIPSISELAQKLLTLSCASDHEPTSLAAAKSLSGVVNKWDQGEQLQTFLQETRDCLEQIL
SKTEDEKARCRAVAVLVWLTKALVIRGHPSGSQFTKTLMALFEDEAIGRRAAEGFYVILS
DSPDVLSKESHANIRLMYKQRFFMENLPALVDGFNQADDGRKQSFLCAVSHLLTFIPRQV
LLGALPPLVPLLVQSLLGEDPSLQVSTLEMFSSLVQEAPQVISKNIDALIPQLLELSKNG
PTMKVRMAALKSVGSMTSLPHAVVYPYRNRVVRELAVAVGDKKRMVRKEAVAARGEWFLL
GSPGGK
NT seq 3081 nt   +upstreamnt  +downstreamnt
atggcagcgctcagtgggaacgtgcaggaaaacgtcttggaatttgtacaaggacagcaa
gatagcgccttgcagagtgtcgctaaagctgtgtttgatggggaaaccagcctgttacaa
ctggtggaaagtctcgggtcctccctcaccagtactgaggtgacaacccgagcaagagcc
acccagctgctggcagaggtactgcacaggtcgcctagcaacaggctgacagagaaagaa
gctgaggtgttgtctgccttcttctgtgatcgactgttggaccaccactcagtccagcca
catgtactacatggacttttggccctgagtgcagctccacagctaccacagggagaggaa
gtcaagattgtacaggtcatctttaaggaggtgtatgtccagtccctggtgcagacggac
agaagagccatctacaacatcctggcgaacttcctggacaccagactggaagccctgcag
gccctgggtgcagattttgtctgggggtttatccaggccatggacggagagaaggacccc
agaaacctcatcatagccttcagcattgccaggatcgtcgcacaggcttttcctattgga
acgttcacagaggagttgttcgaggtcatctcctgctactttccgattgacttcactccg
ccagctgatgacccccatggtgtaacgagggaggacctggtgctgggactcaggcaggtg
ttagctgctacaagcaagtttgcacagttctgtgtgcccatgttgctggagaagctgtcc
tctgatgtgaccagtgccaaactggactctctccatacactggcagcctgtgcagaggta
tatggtgcagacagtatgaagtctttcctggacctgctgttgtctgccatcagtaaggag
gtgtacagctccatacaccaggatgtggagaacgcagccctggccggactcaccgctgtg
gtagcaacactgtcacatgctgtcacagagactcggtctgtgttctccctgcatcacttc
ttggacagcctcctgaagggttgtaaacaccacctgtgtgagcctgagctgaagctgatg
tggcccagcgcaaagctgctccaggcagcagcacgagcctccgacccggcatgcgtccac
gtactggacactgctgtgcccctattggtggagcagtttcaggtccacccctacccccag
caccgtcacaccatcctggaagtcaccatcgcgttcatccacgtagctcacgcctctacc
tcgggaaccgacgcgcccaatcccgtcgtcccccacagcgacaacttcctcaccctgttc
tactccgttctcgaagacgccgacgcgggactgcggagtagcggggtcggcgggatggca
gccatgattggcattactgatgttgtaaaagggaaacatttagatttgtgcgcaaatcat
cttggccggctagttcttcatgacgcagatcccacggtacagcgtaggagcactgaggca
ctcgctgccatggcaacggcccatcccgacgtagtacgagaggaagttttgtccaaactt
ctccaagtgctggagaacaacaacccaaacgccatggacacaaaccagagcgagcaagta
tgcgccaaacatgtgacaaatcagtacgtgttgaacactctggcagccgtctcgactcac
cccaccattgtaagatgtacaattcccaaactgttgagtcacctccaagctttgatagaa
agttgtccagaccaagccacacaggaagccattgctacgttagactgtgtctacaaagta
gtagaaaaaactgtgatcaacgacgctaatgtagaatattttgttgatacgattgtacta
aatcttatgtccatggctctatctgctgctgtgaatacgtcagatgaaaacctactccac
gatacgtcacttctagaaattgtagctaaggtgttgagggctgtagctcgaagcctacca
aacagtacagggaagggtattgtcaacagtactgtacaggccttccttcagggcaactta
gccgcaatcagtcttaacacgtcggcaagcttcgaaccgctagacgtttcctcaccatgg
caacagacccaaacagttcagctcctcagcgctatagtgtgtagtgtggcacgaaacgtc
gacattccctctataagtgaacttgcccagaagctattgacgttgtcttgtgcatccgac
cacgagcccacctccctcgcagctgcaaagtccttgtctggtgtggtcaacaagtgggac
caaggggaacagctccagacatttctacaagaaacgagagattgtttggaacaaatcttg
agtaagactgaagacgagaaggcaaggtgtcgagctgtagctgtactagtctggttgacc
aaggccctggtgattcgaggtcacccctcaggttcccagttcacgaagacgctcatggca
ctcttcgaggatgaagcaatagggagaagggcagctgaaggtttctacgtcatcctcagc
gactctccagacgtcctgtctaaagaatcgcacgccaacatccgcctgatgtacaagcag
cgcttcttcatggaaaacctccccgccctggtggacgggttcaaccaagcggacgacggg
aggaagcagtcgttcctgtgcgcagtctcgcacctcctcaccttcataccacgtcaagtt
ctcctgggcgcgctcccccctctggttcccctcttggtacagtccctgctaggcgaggat
cccagtctgcaagtgtcaaccctggagatgttttccagcctcgtccaagaagccccccag
gtgatttcaaagaacatagacgctctcatcccacagctactcgagctgtcgaagaatggt
ccgaccatgaaggtacgaatggcggccctgaaaagcgtaggcagcatgacgagcctccct
cacgcagtcgtgtacccgtacagaaacagggtggtgcgagagctggccgttgcagtcggg
gacaagaagaggatggtcaggaaggaggcagtggctgcaagaggagaatggttcctgcta
ggaagtcctggaggaaaataa

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