Branchiostoma floridae (Florida lancelet): 118413858
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Entry
118413858 CDS
T01074
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfo03009
]
118413858
Ribosome biogenesis [BR:
bfo03009
]
Eukaryotic type
90S particles
Other 90S particles
118413858
Pre-60S particles
Other pre-60S particles
118413858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
ARMC9_ARM
LTN1_E3_ligase_6th
UTP15_C
Motif
Other DBs
NCBI-GeneID:
118413858
NCBI-ProteinID:
XP_035673332
UniProt:
A0A9J7KZZ4
LinkDB
All DBs
Position
4:22865668..22897464
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AA seq
1310 aa
AA seq
DB search
MTKIKRLKAGKGKRWRKGQSSSSNPDVKSHRAAARNRFFNYDNQGKGDLTESALRRHDQA
VEDGEGDVAMGEGDVQSVGGGTLASFRTGFSAWSDCTNTTFNKVERYWQSNSAQAQEVCA
VLAAVTEVIKSQGGKETETEYFAALMTALETVEGDESLSAVTYLLALVMKKVPSAVLQSR
FSDISKSLMNILAANINTTTHSILRWTVVCLGVVLRQQEAVVWSDASTLQLYHGLLNFTS
SDRPRVRKAAQHAVCSILRGSPFMTRENAPAHHPAASATAKFCIQQMEECGGGGEAKQTM
YILGLQENILPIMPLATIKSICETILKVMTLGNVLVTSVSMKTLHAFFRARPKHLSPELN
AQIISALFDYQPGLNDAQPTQAWLTLMQEAHVNLAGVNAQLCLSHLPRMFHASMECLLSE
KPAVVSSAADTMKNLLKSCVEPTADRIALTVSNAPSASQTPVHKIFGCVEAGLQYRYHAA
WGKVIQVLAVFFEVLGKRCHSLMQKCLASLADLRSSHKFPHTQEVDRAVGAALRAMGPRV
VLQAVPLQIKGDESDDINFPRSWLLPVIRDHVRDTELGYFVKYFLPLAAQLRTRALELQQ
EGKSVLSKAYDTLQHQIWSALPGFCTRPTDLAQSFKGIARILGSAITDRPDLRNMVLLAL
RTLLSKSTDSEENKKELGRFAKNYLPILFNIYTTEPKEGDPTVLPVLATVKSYLTVAPSQ
LVHELHDKATQKMEAPDTTVYAKNGVRSLMAALVPYVDQTRLANTYQITAPLLQSKDITV
QKRAYRLLEELVSCTSESCQEFVESHLEQLQTQLLGTLSASKSPARAPRLKCLIHVVKRL
PSDREDFLKAILPEVILCTKEVAVRARLTAFTLLVEMGQAWLRGRSSQDRKDAIEEFLQL
VFAGLGGSNHMMSATVLALTRLMYEFKDLISASLLGQLVESICLVLSSKAKDVVKSALGF
VKVLVMTTDNITLAQHVRPLVECLVSWGEDYQRKYRFKTKKIFEKLVKKFGYEMIAGMVP
DSHQKVLVNIRKTLARCKKKKQLKEAGEHEEDSDEEELMPKKTPQSIDDLLEELDSDLEE
ELLRRLPLERGVRRVGVAKAGQPGLRKGTRRNLWTFWTHGASKRIIATNPGAKGGKGRGD
PGTGFKMAADGRMIITEEEEDEEEQGKKKQKRKSAGDDDDEMEDLMEDVPGLKSGKRKHG
DLEDSDEEDQSPRKYKAGGKGIHRPLNKAGGSLGEEYKAKKAGGDIKKKGQPDPYAYVQL
NPQYLNKRKRQKRQGQFKGMVRAAQRGAEKGGRAQNTMRRKMKTNKKHKK
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaattaaacgtctaaaggccggaaaaggcaagcgatggaggaaaggacagagc
agcagctccaatccagacgtgaagagtcaccgagcggctgcacggaacagatttttcaac
tacgataaccaaggaaagggcgaccttacagagtcagccctgcggagacatgaccaggct
gtggaggatggggagggggatgtggcgatgggggagggggatgtgcagagtgtgggggga
ggcaccctggccagcttcaggaccggcttcagtgcctggtcggactgtaccaacaccacc
ttcaacaaggtggagcgctactggcagtccaactcagcacaggcacaggaggtgtgtgcc
gttttggcagcagtgacagaagtcatcaagtcacagggaggaaaggagacagagaccgag
tactttgcagctcttatgacagctctggagactgttgaaggggatgagtctttatctgct
gtgacatatctcctggctctggtcatgaagaaggtacccagtgcagtgctgcagagcagg
ttctctgacatcagtaagtctctgatgaacatcctggcagccaacatcaacacaacaaca
cactccatactcagatggacggtggtgtgtttgggtgtggtgcttcgtcagcaggaggca
gtggtctggagcgatgcctccaccctccagctctaccatggactcctcaacttcaccagt
agtgacaggcccagggtgaggaaagcagcgcagcacgctgtgtgtagcatcctgcgggga
agccccttcatgacacgagagaacgccccggctcaccaccctgccgcctccgccaccgcc
aagttctgtatccaacagatggaggagtgtggaggaggaggggaggccaaacagaccatg
tacatcctgggtcttcaggagaacatccttcccatcatgcctctggccaccatcaagtcc
atctgtgagaccatcctcaaggtcatgactttgggcaatgtgctggtgacatctgtgtcc
atgaagactttacatgccttcttcagagcacggcccaaacacctgtctccagaactcaac
gcacagatcatctcggctctgtttgactaccagccaggtttgaatgatgcccagcctaca
caagcatggctaactctgatgcaggaggctcatgtcaatctagctggtgtgaatgcccag
ctgtgcctgtcccacctgccccggatgttccatgcctccatggagtgcctgctgtcagag
aaaccagcggtcgtctcctcagccgcagacaccatgaagaacctgttgaagagctgtgtg
gaacctactgcagacagaatagctctgactgtcagcaatgcaccatcagcgtctcagact
ccagtacacaagatatttggctgtgtggaggctgggttgcagtacagataccatgcagca
tgggggaaggttatacaagtactggcagttttctttgaggtgctgggaaagcgttgccac
agcctgatgcagaagtgcctggcatcgctagcagacctccggagcagccacaagttcccc
cacacccaggaggtggacagggccgtgggtgctgcgctgcgggcgatgggacccagggtc
gtcctgcaggccgtaccactgcagattaaaggggacgagtctgatgatatcaacttcccc
cggagttggctcctccccgtgatcagagaccacgtcagggacacagaactgggctacttt
gtcaagtacttcctgcctctagctgcacagctcagaacaagggccttggagctgcagcag
gaagggaagtcagtgctgtccaaggcttacgacacgttacagcaccagatctggtcagca
ctgcctggcttctgtacaagaccaactgatctggcacagtctttcaaaggaatcgctcgt
atcttggggtcagccatcaccgacagacctgacctaaggaacatggttctgctggctcta
cgtacactgctttccaaaagcacagactcagaggagaataagaaggagttgggaaggttt
gctaagaactacctgcccatcctgttcaacatctacaccacggaaccaaaggagggggat
cctacagttctacctgtgttagcaactgtcaagagttatctcactgtagcaccaagtcag
ctggtacatgagctgcatgacaaggccacccagaagatggaggcccccgacaccaccgtg
tacgctaagaatggcgtcaggagcctgatggccgccctggtgccgtatgtggaccagacc
aggctggcaaacacctaccagatcactgcaccactcttacagagcaaggacatcacggta
cagaagcgagcttatcgcctgttagaggagctggtgtcctgtacctccgagtcatgccag
gagtttgtggagagccacctggagcagctgcagacacagctgctggggaccctctctgcc
tccaagtcacctgccagggctccgagattgaaatgtctgatccatgtggtgaagagacta
ccttctgatagggaggactttctgaaggcgatacttccagaggtgatcttgtgtacaaag
gaggttgcagttcgtgccagactgacggccttcactctgctggtagagatgggccaggct
tggctgaggggtcggagttcacaggacagaaaagatgccattgaggagtttctacagttg
gtgtttgctggactgggcgggtcgaaccacatgatgagcgccactgtgctggccctcacc
agactcatgtacgagtttaaagatctgatttcggccagcctgctgggtcagctggtggag
agtatatgtctggtgctatcctccaaggccaaggacgtggtcaagtccgccctgggcttt
gtcaaggtgctggtgatgaccacagacaacatcacactggcacagcatgtgagacctctg
gtggaatgtctggtgtcgtggggagaggactaccagagaaaatacagattcaagaccaag
aaaatctttgagaaactcgtcaaaaagtttgggtatgagatgatagctggcatggttcct
gactcccatcagaaggtgctagtgaacatcaggaagactctggccaggtgtaagaagaag
aaacagctgaaggaggctggggagcatgaggaggattccgatgaagaggaactcatgcct
aaaaagacgccgcaaagtattgacgacctgctggaagaacttgactctgacttggaagag
gagctgctgcgaaggctgccactggaaagaggggtcagaagggtgggcgtggccaaggcg
gggcagcctggtctcaggaagggcaccaggaggaacctctggactttctggacccacggg
gcttcaaagagaatcatagccactaacccaggtgccaaaggagggaaaggaagaggagat
ccaggtacagggttcaagatggccgctgatgggaggatgatcatcacagaggaggaggaa
gatgaggaggagcaggggaagaagaaacaaaagaggaaatctgcaggtgatgatgatgat
gagatggaggacctgatggaggatgtaccagggctgaagtcaggcaagaggaaacatgga
gacctggaggactctgatgaagaggaccagtctcccaggaaatacaaagcgggaggaaaa
ggaatccacaggccacttaataaagcaggaggcagtttgggggaggaatacaaagccaag
aaggcaggtggtgatataaagaagaaaggacaaccggacccatatgcctatgtacaactc
aacccacagtatctcaacaaaagaaaacgtcagaagaggcaaggtcagttcaagggcatg
gtgcgtgctgcgcagaggggagctgagaagggagggagggcgcagaacaccatgaggagg
aaaatgaaaacaaacaagaaacacaagaagtga
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