Branchiostoma floridae (Florida lancelet): 118413907
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Entry
118413907 CDS
T01074
Name
(RefSeq) caprin-1-like isoform X1
KO
K18743
caprin-1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118413907
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
118413907
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
118413907
NCBI-ProteinID:
XP_035673430
UniProt:
A0A9J7MN84
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Position
4:complement(10755837..10769489)
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AA seq
842 aa
AA seq
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MPSASSKPRPGSPQEHQNALQQVLNIVEKKVRNLEKRKQKLDGYRELSKKGEELNKDQLE
AAAKYDEVVQCLELTNDFMKQFLTINAETQKLVKKAEKRQLLAQREVELKRVQDLLEIQH
VLDLLGTDAVRDDFKQGKPGAVPLTEAQLTQLDELYKVINPETEEGTSFSSQQADASEHV
LCLLDAREKEIAGTTYKDLRELLQEVVNCPYWDNMHAQPEPPSENGPAQEEQQEEEEEEV
EEEAPPQQVPPQEEFVAVETEDITTVEETEVLKTSLVFERRVQEPLAPEPPQEPLVSNQT
SASMADSMFAMTAAQQAMVVRPQRSLDEVLATVQGSFNFMQESLIDRETPTHSMDPAVVA
AQPSMSGPPKPITPPPSVQQKEQSQQTGYPQQAPAQVPQAPRTITPPPTATTTQTQTNQT
LYGQSYTGNAQLGQTANNQYSSNSYGQSSSQYNAQNSQYNSQQSQYGSSTANSQYSSQQT
STNYQTSSSTQYGSQAVAGTQYGGQTGLSQMSNQQYNSQQWGVDTSSHTEQSLGKLGSSS
LGSQSQGLSDHSLGNIGSSYNPPPTIPLPNDQSTMQTSQSYGLQDSSQAGQLSYTGHEAS
KMAALNDNNRIPLPNETPTIPMPNQNDVQVPKSSAGTNVNAAPFQSTMASYSMQGNDNPQ
QMSPPQGQQYPAQSEQFGDATVTTGDSGGFQQSGLMTSQQHFRNQPFQNRGGRGGRGSRG
NSASFRGRGGMNGRGNARFNSAFTGFYQNSNPGYQGGFRGDQTFPNTYGQDQQRGYTRQQ
DGFPRGGRGGIGPRGAPRGAIAVGGRGGMRGMVSPRGGRGGFNKPPSSQPGAASPPQPQA
VA
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgcctcgtctaaaccccgaccaggctcgccacaggagcatcaaaatgctctc
cagcaagtcctgaacattgtggagaagaaagttcgcaatttggagaagcgaaagcaaaaa
ctggatggatatcgagaactatccaagaaaggagaagagctgaacaaagaccagctggaa
gccgccgcgaagtatgatgaggttgtgcagtgtctggagctgactaatgacttcatgaag
cagttcctgacaatcaacgctgagacccagaagttggtgaagaaggcggagaagcgccag
ctgctggctcagcgggaggtggagctcaagagagtgcaggacctactggagattcagcac
gtgctggatctgctagggaccgacgctgtgcgcgacgacttcaaacaggggaagcctggc
gccgtgcccctgacagaagcccagctgacacaactggacgagctgtacaaggtcattaac
cctgagacggaggaaggcaccagtttcagcagccagcaggcagacgccagcgagcatgtc
ttgtgtcttctggatgctcgtgagaaggagatagcaggcaccacatataaagacttgcgg
gaattgctccaggaagtcgtgaactgcccgtactgggacaacatgcatgcccagcctgag
cccccctctgagaatgggccggcccaggaagaacaacaagaggaagaagaagaagaggtg
gaggaggaggccccaccccagcaggtgcctccacaggaggagtttgttgccgtagaaacg
gaggacatcaccactgtggaagagactgaggtgctcaaaacttccctggtctttgagcgc
cgggtgcaggaacccctggcccccgagcctccccaggagcccctggtgtccaaccagacg
tcggcgtccatggccgactccatgttcgccatgacggcagctcagcaggcgatggtggtg
cgaccgcagcgctcgctggacgaagtcctggcaacggtgcagggcagcttcaacttcatg
caggagtcgctcatcgacagggaaaccccgacccatagtatggacccagctgtggtcgcc
gcgcagccaagtatgtcgggaccccctaaacctatcactccgcccccttctgtacaacag
aaagaacaatcacaacagacaggatacccccagcaggccccagcacaggttccgcaggct
cccaggacgatcaccccgcccccaacagccaccacaacacaaacacagaccaatcagact
ctgtacggccagtcgtacacggggaacgcccagctcggacagacggcaaataatcagtac
agcagcaactcgtacggacaatccagcagccagtacaatgctcagaactctcagtacaac
tcccagcagagccagtacggcagcagcacagcaaactcacaatacagcagtcagcaaacg
tctaccaactaccagaccagctccagcacacaatacggcagccaggctgtggcgggcacg
cagtacggaggacagactggactctcacaaatgtcaaaccaacagtacaactcacagcag
tggggcgtggacaccagctcacacacggagcagtctctcggtaagcttggctcctcctcg
ctgggctctcaatcgcagggcctgtcagatcattccttaggaaacataggctccagttac
aaccccccgcccaccattccccttcccaacgaccagtccaccatgcaaacctctcagagt
tacggacttcaggactcctcacaagctggccaattgtcttacacgggccacgaggcatcg
aaaatggcagctctaaatgataacaacaggattcccctgcccaacgagacgccaaccatc
cccatgcccaatcagaacgatgttcaggtcccaaaatcgtcagccggcaccaatgttaat
gcagcaccgtttcagtccacgatggcgtcgtactcgatgcaggggaacgacaaccctcag
cagatgtctccgccccagggccagcagtaccctgcacagagtgagcaatttggagatgct
actgtcactacaggagactcgggaggattccagcagtctggcctcatgacgtcccagcag
cacttccgcaaccagcctttccagaaccgagggggacgcggcggtcgtggcagccgggga
aacagcgcctccttcagaggacgtgggggcatgaatgggagagggaatgcacgcttcaac
agcgcgttcacaggtttctaccagaactccaatcctggttaccagggtggtttccgtggt
gaccagacgttccccaacacgtacggacaggaccagcagaggggctacaccaggcaacag
gatggtttccccaggggaggcaggggcggcatcggccctcgtggagcccccaggggagcc
attgctgtaggaggtcgcggagggatgcgtggtatggtgtccccgagaggcggacgtgga
ggcttcaacaagccgccatcttcccagccaggcgcggcctcccctccccagccacaggca
gtggcatag
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