Branchiostoma floridae (Florida lancelet): 118414169
Help
Entry
118414169 CDS
T01074
Name
(RefSeq) UV-stimulated scaffold protein A-like
KO
K23720
UV-stimulated scaffold protein A
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
118414169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118414169
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
118414169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
CID
DUF6449
Motif
Other DBs
NCBI-GeneID:
118414169
NCBI-ProteinID:
XP_035673916
UniProt:
A0A9J7L0Y5
LinkDB
All DBs
Position
4:complement(26143842..26158093)
Genome browser
AA seq
770 aa
AA seq
DB search
MDLTVCQQLEQLVEQLTTSGQHQLDKATVKTLKNICKTSDEYVKHTYHLLNTQLQKDHAE
IRLSAFQTMDQLFQRSHAFRELLIAEFQEFLELTVESNYDFPLPPPKAAADKLKKQALQA
IQRWQDKFGEAYKKLTLGYNFLRYNRKVDFNNIAASSNVERTRQEQERARIQAIKLQRAK
NGLKEMEETKPEIDECLTQTESCFQLLVPRNDVLDFNTTSPKNVEQHTNNTLPTTSHGSK
QSRKKLDGKDISSDTFIPKGQARGQELLAGEASPVPGDRGRLNNGGDSKMPGQEGDSGED
SDDEFEAEEEDVVRQHGLGSHKYNISIEFNPDDSGIREDTDNADIMDTLRDMNKLIVSRF
LPAVGRWLEVFSKAGMEQKEVKRAIDIKRALTAAMEKCADLGIHAENRTGKQQGREGRKG
SQDDSSDDDFVEVEEKEGYEPRIPDALRAEYGLEPAKPETKTKSIAPKPRPVPASATVTS
AATTSGTKPPTKKSWHPLYSEDNNPSDPTSYSAALSTLQPSQDNRVGKRKVSFDAQPSTS
GASPTKKELLAKAPVVPFGMDLYTWGEKARKPTIVRDESLHRFWRPSDEGEIEVNHLDPS
RERTITFVGEFEPVKWTCKAPLSNGKLCPRMDRHKCPFHGPIIPRDETGKPANPEDAERE
ERRRREQQLEETEVSEDWRDPELQRDIAAATGISMGNVPGRGKGKGKGKGKGKKLSNLTD
LKKVKNTTRRRLERKVFNSGSVKRVASEMNRLDQRRYNDKFGNQFNYALN
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaccgtctgtcagcagctggaacagttagtggaacagctgacaaccagtgga
cagcaccagctggacaaggcaactgtcaaaactctgaaaaatatctgcaagacgtccgat
gagtacgtgaagcacacgtatcacctgctgaacacacagctgcagaaggaccacgctgag
atcaggctctctgccttccagaccatggaccaactcttccagcggtcccacgccttcagg
gaactcctcatagcagagtttcaggagttccttgagctgactgtggagagcaactatgac
ttcccactgcctcctcccaaggcggcggcagataagctcaaaaagcaggcccttcaggcc
atccagcgctggcaggacaagtttggggaggcctacaagaagctgactctaggctataac
ttcctcaggtacaacagaaaggttgattttaacaacattgctgccagcagtaatgtagag
aggaccagacaggagcaggagagggccaggattcaggctatcaaactgcagagggccaaa
aatggactcaaggaaatggaagaaacaaagccagagatcgatgaatgtttgacacagaca
gagtcctgttttcaactcctggtgcctcgaaatgatgtcttggattttaacaccacttca
cccaagaacgtggaacaacatacaaacaacactctacccactacctcacatggatcaaag
caaagtagaaaaaaactggatggaaaagatatcagtagcgatacatttattccaaaggga
caagccaggggacaggagctgcttgcaggggaagcttcacctgtgcctggggataggggc
aggttgaataatgggggagattcaaaaatgcctggacaggagggagacagtggtgaggac
agtgatgatgagtttgaagcagaagaagaggatgtggtcaggcaacatgggctcgggtcg
cacaagtacaacatcagcatagagttcaacccagatgactcagggatccgtgaggacaca
gacaatgctgacatcatggacacattacgggacatgaacaagctgatagtcagcaggttc
ctgccggctgtggggaggtggctggaggttttctccaaagcaggcatggagcagaaggag
gtgaagagagccatcgacatcaagcgtgccctgacggcagccatggagaaatgtgctgac
ttgggcatccacgcagagaacaggactggcaaacagcagggaagggaaggaaggaagggc
agtcaggacgacagcagcgacgatgattttgttgaagtagaggagaaagagggatacgaa
ccaaggatccctgatgctcttagagcagagtatgggttggaaccggctaagccagaaaca
aagactaaatctatagcaccaaaacccagacctgtgcctgcatctgcaactgttacgtct
gctgccacaacttcggggacaaaacctcccaccaaaaagtcctggcatcctctctatagt
gaggacaacaacccttccgacccgacctcatacagcgcagcactgtccacactccaacct
agccaggacaacagggtaggaaagagaaaagttagctttgatgcccaaccgtctacttca
ggagcatcgcccaccaaaaaagaactgttggcgaaggctccagtagtaccgtttggtatg
gatctgtatacatggggggagaaggcaagaaaacctacaattgtcagggatgagtctctg
cacagattttggcgcccgtctgacgagggtgaaatcgaggtgaaccatttggatccttct
agagagcgaaccatcacgtttgtcggggagtttgagccggtcaagtggacgtgcaaggcc
ccattgtccaacggcaagctctgccctaggatggacagacataagtgcccgtttcatggt
cccatcatcccgagggacgagacagggaaacctgccaaccctgaagatgcagaaagggag
gagaggaggagaagggaacagcagttagaagaaactgaagtatcagaggattggagggac
cccgagctacagcgggatatcgcggctgccactggcatctctatgggcaatgtcccggga
cgggggaagggcaaaggtaaagggaaaggaaagggcaagaaactcagtaacctcaccgac
ctcaagaaagtcaagaacacaacaaggagaagactggaaaggaaggtgttcaacagtggt
tcagtcaagagggttgcaagtgaaatgaacaggctggaccagcgacgttataacgacaag
tttggcaaccagttcaactatgccctcaactga
DBGET
integrated database retrieval system
