Branchiostoma floridae (Florida lancelet): 118414201
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Entry
118414201 CDS
T01074
Name
(RefSeq) protein polybromo-1-like isoform X1
KO
K11757
protein polybromo-1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118414201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118414201
03036 Chromosome and associated proteins [BR:
bfo03036
]
118414201
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118414201
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
118414201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Zap1_zf1
zf-C2H2_REST
CHDNT
Motif
Other DBs
NCBI-GeneID:
118414201
NCBI-ProteinID:
XP_035673964
UniProt:
A0A9J7L1I7
LinkDB
All DBs
Position
4:complement(19549828..19559691)
Genome browser
AA seq
1773 aa
AA seq
DB search
MAKRRRSSSVGMDVRLEEDMGPSMKTRRKSAPSIDTGTCEVIQDLYDIIRNHRDENGRLL
CDPFIRAPNRRNAPDFYEAVDTPIDMLRIQQRIRTDEYRTLQDFTADVDLLVNNAKRYYP
QGSQQYNDASALWEIYVEARDEILHEVHGGISGDTLEGKAKRRREEMDETTEEEEEEEDI
EGEDQEEIDFPPFAADTENPYEQLFVAMADATDPTGRAMSFLFQKLPVRSEFPEYYKIIK
DPMDLTMVARKIKRNVYNTLADMERDISLMVRNAKTFNEPGSLVYKDAVALKKIFSLKKA
ELEGEPVGVRSSDRSSRRSGRSGLSSRLSAITAALQYSSEEEDQSEASERVSITEYEEES
EADSSMYEEGNTFLALYDHVRGYSTGQGMCLSEPFLKLPSKKAYPDYYQEIKHPMSMLKI
RSNIKQGLYETLDHLEADFTLMFENAKQYNMTGSRIYKDAVKLQQVMQVKKRELTKSDSN
YGDTESVLSSASGVSRKVKRPQIMEDLEEKRKKKKKDEGENTLKGRLRFLYDAMIGYCDA
FGRFLIELFMEKPSRKDYPEYYKIILEPIDMKTIDYNIRTDKYSSVEAMLEDFDLMFNNA
RHFNEEGSQVYIDACTLEKVLKDKVKQLGPLTSEGGLFSPKAGLKGPRKSSPKKSKFLTP
LQQKLRDMYDSVKDYKDSTGRKLCFMFLQLPSKIDYPDYYQVIKKPIDMQKIEANMRSNK
YNTVEDYLEDFLQLFDNACRYNEPDSQIYKDALILQRALLEKRDEVHGDGSSEVPDIRGC
VQDLLNSLFVSVLNHQDEEGRCYSDSLSELPEKEDKKEREQQQEPHKRGPASFKAIRRNL
DKGRYRRLDVFQEDVFRVFERARRVSRTDSEMYEDAVELQQFFITIRDEICKNGELMLSP
ALSYTHKHLQVELDAEKKEKIPKELEEDKEKKDDDGKEEDELEEESSETAMQRKYSEDVS
WEDQSFRVGDFVYIENQDKSLPPHIVCIEKLFQDDQGDQWLHGCWFYRPKETFHLATRKF
LEKEVFKSDYYNIARIASIRGRCFVMSVKEYFKSKPQGVSDDDIFVCESRYSARAKAFKK
IKIWPTPPSNVKIIPREEPLSKVRVASVFAEEAKLEEQEAETEDQEEEEEDVIDKVRENI
AVEASNTTEPGISHYEQFIYGGTCFKLGDSVYVKSSREQPLMARIDKMWVDANSEPWFHG
QWFIYPSETDHNPTRLFYKNEIFLTSMEESKSMRTILGKCCILAYKDYLICRPTEFMEDD
IWVCEARYYEADKQIRKIKALKKYSLSPKVTDDEIFFFRKPIVPGKVPSPKLAEISEEPV
AFAVPPDADEELQQPSTPIKAPKAKRPPSGYILFSSEMRATLKKQNPNYAFGEISRIVGM
EWKNLSAAQKAVYEERAQQQSSSQNDDESPYPASPASGHSSSRSDPLILVWECLWEGCDY
QYESEKDLVAHLLETSGHLKPEGEQQEYFCYWAGCPRSRVKKSLPFPNISGMKRHVREVH
VKTSSRQIPLSQRSRNYIPYQPGYQASPSQSPRPFTPQGSGAVLGVVPPPMPAGMLSQTQ
MAANGTPGQRMTPGTNQPLTPGQSMNMPANSLQYASFSQIPGAFPPQSPFPQQGGYSQQP
PLSQGGPIPPQMYPPQMGPPPVGTTPPAPQYFYGQGGTQYGVHPQTQSPAPPPQPPPPPM
FVPPPPKAQRLLHSEAYIRYIEGLKVENRSVSNWEETLTVRQEDVQLTEQQRARLPGHIL
KNGKGPHKNMESALWALRDLMLKDALTIGNFHN
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atggctaagagaaggaggtctagctctgtggggatggatgtacggctggaggaggatatg
ggtccttccatgaagactcgcaggaaatctgctccatctattgatacaggtacctgtgag
gtcatccaagacctgtatgacatcatacgcaaccatagggatgaaaatggccgcctgctg
tgtgatccattcatccgtgctccaaaccgtcgcaatgctcctgacttctacgaagctgtg
gacacccccatcgacatgctcaggattcagcagcgaatcagaacggacgagtaccgcacc
ctgcaggacttcactgctgacgtggatcttctcgtgaacaacgcaaagaggtactaccca
cagggtagccagcagtacaacgatgccagcgccctgtgggaaatctacgtggaggcccga
gatgaaattctgcacgaggtccatgggggcatcagcggggacacactggagggaaaggca
aagaggagaagggaggagatggatgaaacaacagaggaggaggaggaagaggaggatatt
gaaggggaggatcaggaagagatcgacttccctccctttgcagcagataccgagaatcca
tacgaacagctcttcgtagccatggctgatgccactgacccaacaggcagagctatgtca
ttcctattccagaagctgccagtgcgctcagaatttccagagtattacaagatcatcaag
gatcccatggatctgacgatggttgctcgtaagatcaagagaaatgtgtacaacacactc
gcagacatggagagggacattagcctaatggtaaggaatgccaaaaccttcaatgagcca
ggatcacttgtctacaaagatgctgtggcactgaagaagattttctcactgaagaaggca
gagcttgagggagagcctgtaggagtcaggagttcggacagatctagtcggaggagtggt
aggtcaggactgagcagccggctgtcggcgatcactgcagccctgcagtactcatcagag
gaggaggatcagagtgaagctagcgagcgcgtgtcaatcacggagtacgaggaagagtcg
gaagcagacagctccatgtacgaggagggaaacacattcctggcactgtacgaccacgtc
agagggtactccactgggcaagggatgtgtctgtccgagccatttctcaagctcccatcc
aagaaggcgtaccctgactactaccaggagatcaaacatcctatgtccatgttgaaaatc
agaagcaacattaagcaggggctgtacgagaccctcgaccacctggaagctgactttacc
ctgatgtttgagaatgccaaacagtacaacatgacagggtctcgcatctacaaggacgca
gttaagctacagcaggtcatgcaggtcaagaagagagagctgaccaagtcggacagcaac
tacggagacacagaaagcgtgctgagcagtgcttctggtgtcagcaggaaagtcaaacgt
ccgcagatcatggaagatctggaggaaaagcggaagaagaagaagaaagatgaaggagag
aacaccctgaagggccgactgcggttcctgtatgatgccatgataggctattgtgatgcg
tttggtcggtttctcattgagctgttcatggaaaagccttcccggaaagactaccccgag
tactacaagatcatcctcgagccgatcgacatgaagacaatcgattacaacatccgaacc
gacaagtactccagtgtggaggccatgttggaagactttgatctcatgttcaacaatgca
cgccacttcaatgaggaaggttcacaggtgtatatagatgcctgcacgctggagaaggtt
ttaaaagacaaagtaaaacagctgggacctcttacttcagaaggcggcctcttctctcct
aaagcaggactgaaggggccaagaaagagctcgccgaagaagtccaagtttttgacaccc
ctgcaacagaagttgcgggacatgtacgattcagtgaaggactataaagactccacaggc
cgcaagctttgcttcatgttcctgcagcttccctcgaagatagactatcccgactactac
caagtcattaagaaacccatcgacatgcagaaaattgaagctaacatgaggtccaacaag
tacaacactgtggaggattatttggaggacttcctccagctgtttgataatgcttgccga
tacaatgagcccgactcacagatatacaaagatgccctgatcctgcagcgggcccttctg
gagaagagggatgaagtccacggagatggcagctccgaggtgccagacatccgcggatgt
gtgcaggaccttctgaacagcctctttgtgtccgttctcaaccaccaggacgaggagggg
cgttgctacagcgactccctctcagagttacctgagaaagaagacaagaaggagagggag
cagcagcaggaaccacacaagagaggtccagcaagcttcaaagccattcgcagaaacctc
gacaaggggaggtacaggaggctcgatgtgtttcaggaagatgtgtttcgagtgtttgag
agagccagacgagtcagtcgtaccgactcagagatgtatgaagatgcagtggagctgcag
cagttctttatcaccatcagggatgagatctgtaagaatggggagctgatgctgtctcca
gctctcagctacactcacaagcatctccaggtggagctggatgctgagaaaaaggagaag
attcctaaagaattagaggaagacaaggagaagaaggatgatgatggaaaggaggaagat
gagcttgaagaagagtctagtgaaactgcaatgcagcggaaatacagcgaggatgtcagc
tgggaggaccagtcattccgtgtgggagactttgtgtacatagagaatcaggacaagagt
ttgccacctcatattgtctgtattgagaaactcttccaggacgaccaaggggaccagtgg
ctgcatggctgttggttctatcgtccaaaggaaaccttccatttggccacaaggaagttt
ctagagaaggaggtgtttaagagtgactactacaacatcgctcggattgccagcattaga
ggaagatgttttgtgatgtcagtgaaggaatacttcaagagtaagccccagggtgtcagt
gatgatgacatctttgtatgcgagtctcggtacagtgcaagagctaaggccttcaagaag
atcaaaatctggcccacaccccctagtaatgtaaagataatcccgcgggaggaaccactg
tctaaggttcgagtggcatcagtttttgcagaagaagccaaactagaggagcaggaggca
gaaactgaggatcaagaagaggaggaggaagatgtcattgacaaagtcagggagaacatt
gcagtggaggcatcaaacactactgagcccggtatttctcattatgagcagttcatctat
ggtggaacctgctttaagctgggtgactctgtctatgtgaagtccagcagggagcaacct
ctcatggctcgtatagacaagatgtgggtggatgccaacagtgagccatggttccacggc
cagtggtttatctacccctcagagacggatcacaaccccaccaggctgttctacaagaac
gagatcttcctcacatccatggaggagtccaagtccatgagaaccatcctggggaagtgt
tgcatcctggcctacaaggactacctcatctgccggcccactgagttcatggaggatgac
atctgggtgtgcgaggctcgctactacgaagctgacaagcagatccgcaagatcaaggcc
ttgaagaagtacagcctctcccctaaagtgacggatgatgagatcttcttcttccgtaag
cccatcgtcccaggaaaggtcccgtcaccaaagttggcagagatttcggaggagcctgtt
gcgtttgccgtgcctcctgatgcagatgaagaactgcagcaaccgtcaactcccataaag
gcgccaaaggccaaacggccaccgagcggatacattctgttctccagcgagatgcgagca
actctcaagaagcagaaccccaactatgcgttcggggagatcagccgaatcgtggggatg
gagtggaagaacctgagcgcggcgcagaaagccgtgtacgaggagagggcgcagcagcag
agctccagccagaacgacgacgagtcgccctacccagcatcccccgcgtcgggtcacagc
agcagccgctcggacccgctgatcctggtgtgggagtgcctgtgggaggggtgcgactac
cagtacgagagcgagaaggacctggtggctcacctgctggagacctcggggcacctgaaa
cctgagggggagcagcaggagtacttctgctactgggcaggctgccccaggtctagggtc
aagaagagcctccccttccccaacatctcggggatgaagcgccacgtccgggaggtccac
gtgaagacgtcgtcccgtcagatcccgctcagccagagaagtcgcaactacataccctac
cagcctgggtaccaggcatcgccgagtcagtcaccgcgcccattcactccgcagggttct
ggagctgtgctgggtgtggttcctccccccatgccagcaggaatgttatcacagacacag
atggcagcaaacggaacacctggccagagaatgaccccaggtaccaaccagcccctgacc
cctggacagtccatgaacatgcctgccaacagtctacagtatgcctccttctcgcagata
cccggtgccttcccccctcagagcccattcccccagcaggggggatactcccaacaaccc
cccctgtcacaaggtggaccaatacctccgcagatgtacccccctcagatgggcccccct
cctgtgggtactaccccccctgcaccgcagtatttttatggacagggtggtactcagtac
ggtgttcatccacagacacagtccccagcgcccccaccgcagcccccacccccgccgatg
tttgtgcctcccccaccaaaggcacagagactgctgcactccgaggcttacatccgctac
atagaaggcctaaaggttgagaacaggtcagtgagtaactgggaagagaccctgactgtg
cgacaggaggatgtacagctcacggaacagcagcgggcgcggctccccggacacatcctg
aagaacgggaaaggtccgcacaagaacatggagtctgccctgtgggcgctgcgggacctc
atgctgaaggacgctctcaccatcggaaacttccataattaa
DBGET
integrated database retrieval system
