Branchiostoma floridae (Florida lancelet): 118414289
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Entry
118414289 CDS
T01074
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03030
DNA replication
bfo03410
Base excision repair
bfo03420
Nucleotide excision repair
bfo03430
Mismatch repair
bfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118414289
03410 Base excision repair
118414289
03420 Nucleotide excision repair
118414289
03430 Mismatch repair
118414289
03440 Homologous recombination
118414289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfo03032
]
118414289
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118414289
Enzymes [BR:
bfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
118414289
DNA replication proteins [BR:
bfo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
118414289
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
118414289
MMR (mismatch excision repair)
DNA polymerase delta complex
118414289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
118414289
NCBI-ProteinID:
XP_035674123
UniProt:
A0A9J7L2F6
LinkDB
All DBs
Position
4:17966847..17987977
Genome browser
AA seq
1081 aa
AA seq
DB search
MDTKRKKPTPGPSAKKARSSEWDEDESLDFEAQLAMMEEMEEETVAADGPVSATTRKKWV
RPPPPNLNPRTDSISFQQIDLDHYIGFPMDGMPGSSVGPVPIVRMFGVTMEGNSVVCHVH
GFSPYFYVPAKPEFKVEHCAQFRDALNKIVLNDMRSNKDNVKQAVLAVEMMEKENMYGFH
GNQRLPFLRITVALPRLIAPAKRLLEQGFSCPGYGLHGYQSFESNVDFEIRFMVDTGVIG
CNWIELPAGKYRLKDQLKSLAQIEVDVSWEEFVSHPAEGEWLKIAPLRVLSFDIECAGRK
GIFPEPEKDSVIQIANMVVRQGEREPFIRNVFTLNSCAPIVGSKVLSFKKEADMLAEWSS
FIREVDPDLVTGYNIQNFDLPYLIKRAATLKVTKFPFLGRMKDMRSVIKDQNIQSKQMGK
RENKYVNMEGRVTFDLLQVLLRDYKLRSYTLNAVSYHFLQQQKEDVHHSIITDLQNGSEQ
TRRRLAVYCLKDALLPLRLLDKLMSVINYMEMARVTGVPLTYLLTRGQQIKVMSQLLRKA
REQDLVIPAMQSSVSDEQYEGATVIEPAKGYYDTPIATLDFSSLYPSIMMAHNLCYTTLL
STPSSRASLSPDQFIKTPSGNFFVKKTLRKGLLPEILENLLSARKKAKADLKKETDPFRK
SVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTSFGRTMIEQTRQFVEETYRVAL
GHKHDAKVIYGDTDSVMVKFGVETVAEAMELGKEAAQAVSAKFPHPVKLEFEKVYFPYLL
INKKRYAGLYFTRPEIHDKMDCKGIETVRRDNCPLVAHLINTCLQKLLIYRDPQGAIDHA
KQVISDLLCNRVDISQLVITKELTKEGDEYAAKQAHVELAERMRKRDAGSAPNLGDRVPY
VIIAAAKGTAAYMKSEDPIYVLENNIPIDTKYYLDQQLSKPLLRIFEPILGESKATSVLL
KGEHTLSKTVVSSKISALAGFVKKRSTCIGCKTVLQKEGTAVCKYCKDKESEIYQKEIMQ
LNALEEKFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMRKKVQKDLADQDKMIHRFGSPT
W
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaaagaaagaagcccaccccaggcccgagtgcaaagaaagcgcgttcatca
gagtgggacgaggatgagtcgttggactttgaagcccagctggcgatgatggaggagatg
gaagaggagacagtggctgctgatggacctgtatctgctacgacccgtaaaaaatgggtc
cgtccaccaccacccaacctcaaccccaggactgacagcatcagctttcagcagattgac
ctggaccattacataggtttccccatggatggcatgccaggctccagtgtcgggcctgtg
cccattgtccgtatgtttggtgtaaccatggaagggaacagtgtggtgtgccacgtgcac
ggcttttcaccatacttctatgtgcctgccaaaccagagtttaaggttgagcactgtgca
cagttcagagatgcgctgaacaagattgttctgaatgacatgaggtccaacaaggacaat
gtgaagcaggcagtgctggcagtggagatgatggagaaggagaatatgtatggttttcat
ggtaaccagaggctgccgttcctgcgtatcaccgtggcactgccacgtctgattgccccg
gccaagagactgctggagcagggcttctcctgcccgggctatggtctccatggataccag
tcctttgaaagcaatgttgactttgaaatcaggttcatggtggacactggagtgatcggc
tgtaactggatcgaacttcccgctgggaagtaccgactgaaggatcagctgaagtccctg
gcccagatagaggtggatgtgtcctgggaggagtttgtgtcccaccctgcggagggggag
tggctgaagattgcgccactccgggtgctcagctttgacattgagtgtgctggcaggaaa
ggtatttttcctgagccagagaaggattccgtgatccagatcgccaacatggtggtacga
cagggcgaacgagaacccttcatacgcaatgttttcaccctcaacagctgtgcccctatt
gttgggtcaaaggtcctgtcctttaagaaggaagcggacatgttggcagaatggtcaagt
ttcatccgtgaggtagatccagacttggtgacaggatacaacatccagaactttgacctg
ccttatctcatcaagagggctgcaacactgaaggtgacaaaattcccttttctgggtcgg
atgaaagacatgcgatctgttatcaaggaccagaacatccagtccaaacagatgggcaaa
cgggagaacaagtatgtcaacatggagggtcgggtcacgtttgacctgctgcaggtttta
ttgagagactacaagctgcgatcgtacacgctgaatgcagtatcataccactttctgcag
caacagaaggaagatgttcatcactccatcatcacagacctgcagaatggttcagagcaa
acccggcgccgtctagcggtgtactgtctgaaggatgccctgctaccactgcgcctgttg
gacaaactcatgagtgtgatcaactacatggagatggctcgtgtcaccggcgtaccgctg
acgtacctcctgacccgcggacaacagatcaaggtcatgtcacagctgctcaggaaggcc
agagagcaggacctggtgattccggccatgcagtccagcgtgtcggatgagcagtatgaa
ggagccactgtcatcgagccagccaaggggtactatgacaccccgatagcaacactggac
ttctcgtccctgtacccttccatcatgatggcccataacctgtgttacaccaccctactc
agcacccccagcagcagggcaagcttgagcccagatcagttcatcaagaccccgtctgga
aacttctttgtcaagaagacgctgcggaagggtctgctgccggagattttagagaacctg
ctgtctgcaagaaagaaggccaaagcagacctgaagaaagagaccgaccctttccgtaag
tccgtgctggatggccgacagctggcgctgaagatcagcgctaactctgtgtacgggttc
acaggagcgcaagtgggcaagctgccgtgcctggagatatctcagagtgtgacatctttc
ggcaggacaatgattgaacagaccagacagtttgtggaggagacatacagggtagcactg
gggcacaaacatgatgctaaggttatctatggagacacggactctgtgatggtgaagttt
ggggtggagactgtggcagaagccatggagctggggaaggaggcagctcaggccgtgtcg
gcaaaattccctcatcctgtcaaactggagtttgaaaaggtgtatttcccctatctgctg
atcaacaagaagcgttatgctgggctctacttcactaggcctgagatccatgacaagatg
gactgtaagggcattgagactgtgcgccgtgataactgccccctagtggctcacctcata
aacacatgtctgcagaaactcctcatctacagggatccccagggtgctattgaccatgct
aagcaggtgatctcagacctgctgtgtaaccgtgtggacatctctcagctggtcatcacc
aaggagctgacaaaggagggtgatgagtatgcagctaaacaggctcacgtggagctggca
gaaaggatgaggaagagagatgcggggagcgctccgaacctgggggaccgtgttccgtat
gtcatcatcgctgcagccaagggaacagcagcatacatgaagtctgaggaccccatctat
gttctggagaacaacatccccatcgacactaagtactaccttgaccaacagctgtccaaa
cctctcctccgcatctttgagccaatcctgggagagtccaaggccacctctgtactactc
aagggggagcacaccctgagcaagactgtcgtttcctcaaagatcagtgcccttgccggc
tttgtgaaaaagcgcagcacctgtattggctgtaagactgtcctacagaaggaagggaca
gccgtctgcaagtattgcaaggacaaggagtctgagatctaccaaaaagagatcatgcag
ctgaatgcgctggaggagaaattctctcggctgtggacccagtgccagcggtgccagggc
agtctgcatgaggatgttctatgtaccagccgagactgtcccattttctacatgaggaag
aaagttcagaaggacctggccgatcaggacaagatgattcacaggtttggctcccccacc
tggtga
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integrated database retrieval system
