Branchiostoma floridae (Florida lancelet): 118414440
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Entry
118414440 CDS
T01074
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein homolog isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118414440
Membrane trafficking [BR:
bfo04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
118414440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Dermcidin
Btz
Motif
Other DBs
NCBI-GeneID:
118414440
NCBI-ProteinID:
XP_035674370
UniProt:
A0A9J7L2C7
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Position
4:16389103..16397492
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AA seq
736 aa
AA seq
DB search
MKGLVVINPLPDIVFFWGDVEFTTHINRLGAREGIAEQNGISDEVDQNALVQFFSPLLAS
HRFLKAELDNPYSSISCENGFLFVLRQFGEHLHIAVCGDGSETEEFLKRKLYVFRRLAGV
HYGPVIDELRPDSSHDRKKRWTYMSRLINTWAHLASTEQSFLVEAVERLNVNQALNETCI
NILEQALSKVRSGGDKHAVHALLLVNTKLLALYSSRNACELQAADILAITLVVRTLFPTG
DSLEELLSFTHTPSTPLSVRRVTAERSPTPSSTDYYSPSSSVEETEQEKSEGQGDSSPQP
VPNRDLFHTPIIPHEQDSFHTPAAVQDSFFTPHQPTPASQRAQQPEQNPLLLSACEEALD
ETAESSQEYFHMPAFLQTPLCTHSPHLLHCVPIMPGTVLVIVSEVPKSHLAGHICQCLLT
LVTTEMLQGKTGGSARDGVQGRNQVEVLEGNVKRVLDATRKMKGGLERVHKDLVNRWDLV
RKGGLLEYMDSTAANPPPRLETALSEFTRTLKVLFRLLFLTYKPPQAAEDKQRETMDAVQ
ELVSRKISDYKDYLSVKAQRNVTMTTTYLEDFPGLIHFLYIDRSMDLVIAPAINVTTHPE
PGCFDATAVLKVKVWEMVRRWQHYLQNSFTSSVVRDGDFCYSYFLWFEDPSGNPLSPQQP
VKQVQGAPPGILAGHYYRDLCSRCFPTMPVGAVNCYELMCMHVGVIPAEFVASHCRKLAA
MLWETSGEAHSPISLL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagggactggttgttataaatcctttgccagacatcgtgttcttctggggagacgtt
gaatttaccacacacatcaaccgtcttggagcgagagagggtattgccgaacagaatgga
atttcagatgaagtggaccagaatgccctggtgcagttcttctccccactgttggcatcc
caccgtttcctgaaagcagagttggacaacccttacagttctatcagctgtgagaatggc
ttcctgtttgtgctcagacagtttggagagcacctgcacatagcagtgtgtggagatggt
tcagagacagaggagttcctgaagagaaagctgtatgtcttccgaaggcttgcaggggtg
cactatgggccagttattgatgagctgcgaccagactcctcccatgataggaagaaacgg
tggacttacatgagcaggttgatcaacacatgggcccacctggcctccacagaacagagc
ttcctggtagaggctgtagaaaggctgaatgttaaccaggctctgaatgagacctgtata
aacatcctggaacaggccctgagtaaggtgcggtcaggcggggacaagcatgctgtacac
gccctcctgttggtcaacaccaagctgcttgcactctactcaagtcggaatgcatgtgag
ctgcaggctgcagacatccttgccatcaccctggtagtgcggaccttgtttcccacaggt
gatagtctggaagaactgctgtccttcactcacactccatctactccactcagtgtcagg
agggtaactgcagagcgttccccaactccatcatcaacagattactacagtcccagctcc
agtgtggaggaaacagaacaggagaaatcagagggtcagggggacagcagcccacaacct
gtgccaaatagggacctgttccacactcccatcattccccatgaacaggatagtttccac
acccccgcagctgtccaggacagtttcttcactccccatcaaccaaccccagccagccaa
agagcacaacagccagaacagaacccgctgctgttatctgcttgtgaggaggctttggat
gagacagcggagagtagtcaggagtacttccatatgcctgccttcctgcagactcccctc
tgtacccactccccacacctactgcactgtgtacccatcatgcctggcactgtgcttgtc
attgtcagcgaggtcccaaagagccatctagctgggcatatctgtcagtgcctgttgacc
ttggtcaccacggagatgctgcaagggaaaacaggaggctccgcacgggatggtgttcaa
gggcgaaaccaggtggaagtgttggaggggaacgtcaagagggtcctagatgcaactcgt
aagatgaagggtggccttgagcgggtgcacaaggacctagtgaacagatgggacctggtc
aggaaaggcggattgttggaatacatggacagtactgctgctaaccctccaccaagattg
gaaacagccctgtcagagttcaccaggacactaaaggtgctgttccggctgctgttcctg
acctacaagccccctcaggcagctgaggacaagcagagggaaaccatggatgctgtgcag
gagctggtcagcaggaagatctctgactacaaggactacctgtcagtcaaggctcagagg
aatgttaccatgactaccacgtatctggaggatttccctggcctcatccacttcctgtac
atagaccgttccatggacctggtcattgcgccagccatcaatgtaacaacacacccggag
cctggatgctttgatgcaactgcagtgctgaaggtgaaggtttgggaaatggtacgacgg
tggcagcattacctacagaacagctttacctcctctgttgtgagagatggagacttctgc
tactcctacttcctatggtttgaggacccttcaggaaaccccctatcaccccagcagcca
gttaagcaggtacagggagcacctcctggtatcctggcagggcactattacagagatctt
tgttctaggtgcttccccaccatgccagtgggtgcagtgaactgttatgagttgatgtgc
atgcacgttggggtgattccagcagagtttgtggcctcacactgtcggaagctggcagcc
atgttatgggagacatcaggggaggctcactcgcccatcagcctactataa
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