Branchiostoma floridae (Florida lancelet): 118414537
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Entry
118414537 CDS
T01074
Name
(RefSeq) synaptobrevin homolog YKT6-like
KO
K08516
synaptobrevin homolog YKT6
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04130
SNARE interactions in vesicular transport
bfo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118414537
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118414537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118414537
Membrane trafficking [BR:
bfo04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
118414537
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
GTP_EFTU_D3
Motif
Other DBs
NCBI-GeneID:
118414537
NCBI-ProteinID:
XP_035674518
UniProt:
C3Y4B1
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All DBs
Position
4:11690993..11697758
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AA seq
198 aa
AA seq
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MKLYSLSVLYKRDSKVHLLMGGYDLQSFGYFQRGSVKEFMVFTSQIIVERCREGSRSTVK
EQEYMCHCYIRTDGLGGVLIADHEYPQRVAFTLLNKVLDDFTQKVPAHLWPDGNQNTIHY
TELDGYLAKYQNPREADSMMKIQSELDETKIILHKSIEAVLERGEKLDDLVAKSEDLSVQ
SKTFYKTAKKQNQCCVIL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtattccctgtcggtcctgtacaagagggacagtaaagtccacctcctgatg
ggggggtacgacctgcagtcctttggatacttccagagaggaagtgtgaaggagttcatg
gtgttcaccagtcagatcatagtggaacgatgtagggaaggaagcaggtcaactgtcaag
gaacaagagtacatgtgtcactgctacatcagaacagatggtctgggaggagtgttgata
gctgaccatgagtacccacagagagtagccttcacactactcaataaggttctagatgac
ttcacacagaaggtcccagctcacctttggccggatggaaaccaaaacacaatacactac
accgaactagacggctatttggcaaaatatcagaatcccagagaagcagactccatgatg
aagattcaaagtgaactggacgagacaaaaatcatcttgcacaagtccatagaagccgtg
ttggagagaggagaaaagttggacgatcttgtggccaagtcagaggatcttagtgtacag
tccaagactttctacaaaactgccaagaagcagaaccagtgctgtgtgatcctgtag
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